PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0075s0080.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 446aa    MW: 48161.4 Da    PI: 7.1152
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0075s0080.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2361.7e-11314360152
                   AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkk 52 
                           +++kG+r+++  ++W +eIr  +     + k+++lg++ t eeAa a++a   +
  Sphfalx0075s0080.1.p 314 TRFKGIRQKE--NKWISEIRPsC-----SkKTVWLGTYKTQEEAALAYDAGIFY 360
                           579***9755..8*******944.....35*******************96655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.79E-13314373No hitNo description
PfamPF008471.9E-6315356IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.5E-16315373IPR001471AP2/ERF domain
PROSITE profilePS5103213.854315371IPR001471AP2/ERF domain
SMARTSM003804.3E-8315373IPR001471AP2/ERF domain
SuperFamilySSF541711.96E-12316373IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    Send to blast
MASTTAATMP ADAPRQCQLL PHIKKSFEHA VQGFWNALKK QRAAWKPSGG SSCIPSLPFR  60
RNGHFSSLVN KIATWPRLAS HMASRERSSS SPNAQQPGSS SPAAAVAACR YSLSFPGPGL  120
PSASLTVLQS SRTKYSSNIL EYPRQQQTTS SSIEDEEEDG QEEELQAAPG TSTNASENST  180
PIYIASPDTN AILWEMQDYI LKGIMEVQQL TNGCAAPEMS SHGRTASFDF DFDCEAFTMI  240
PCNSEAEHDG AGDYSSVTTV SENGTASSSA ASQELLTLEN GTASSSAASQ ELLHEPAAAA  300
AVQEQGATAA APPTRFKGIR QKENKWISEI RPSCSKKTVW LGTYKTQEEA ALAYDAGIFY  360
YQKFGIPFNF PDSPKVLPAI KEGPQDVSTK FVKTEARRNA QRAWSSSPGA AQQQQQQQAL  420
SSSASFSLRW SNPCKKRKTD SRCWQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.11e-13ERF family protein