PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0071s0030.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family WRKY
Protein Properties Length: 687aa    MW: 74503.6 Da    PI: 5.7981
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0071s0030.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY71.31.3e-22377435259
                           --SS-.EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                  WRKY   2 dDgyn.WrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                           +Dg++ W+KYG+K++++++f r+YY+C+ ++C++kk v+ ++ dp+++e+tY+g+H+++
  Sphfalx0071s0030.1.p 377 QDGHQgWKKYGKKSIQNANFCRGYYKCSVRECNAKKTVQPTDADPSLFEVTYSGTHTCS 435
                           577766***************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.6E-23371436IPR003657WRKY domain
SMARTSM007748.0E-25376436IPR003657WRKY domain
SuperFamilySSF1182904.97E-20376435IPR003657WRKY domain
PfamPF031062.3E-20377434IPR003657WRKY domain
PROSITE profilePS5081115.721383437IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 687 aa     Download sequence    Send to blast
MDIGRYLSQG MKKMGGGDWE SIQCVEKIQE MLSRAIRDQE DMWKILLSTS STPSDKLGEK  60
AGTSQFGDQL QQQLEAGCNE QQQQQTTCSK ELVPGRILRA LMAKIENSLD WCHLALCRLK  120
EISTTTLQSP ASATPLQQQA GATSMPRRYP NLQAAPNLKL LDAPLCARGI PTRTEDSAVL  180
QDGAFPVSHF LRHYSRGTSS IATLADQSGL ERSLSMLAPD LEPIQGQNFK GMIDPALGLM  240
GSDDWPQLQV ESAMEHVGAV AALAGQCNKL VHKPVEQQQQ VCTSEAFPRS LSSNMVHLKI  300
RADESDVSCA IKDTNNDADT PRKISRSRSM TSKRNQSRLK RDREAAAADG DLAVREHMMV  360
AYQRLRPGVD TKKAIPQDGH QGWKKYGKKS IQNANFCRGY YKCSVRECNA KKTVQPTDAD  420
PSLFEVTYSG THTCSSMRKK QKRVQLPHVP PPAAATAACL AEVSDDLMAL DHPDQLSKIT  480
ATPDEAAAAP AACHEMGRET SSTANASGMK DGDQREDLAG PVTPENGVSV LCLLSTATEA  540
AAAVEDKGLA VDVTAKRFST LPELAAGSSS RHDIAEPTNS SGADLESLEA ISSDSSMPGS  600
CCHNDQDWKA LGNDDQSNSV DMIHTYILST VTSNIAGGLT LHDPEGCPDL KHHDHWQLVH  660
NAGDQVNNFQ DSLFDWPDLL MDTKLL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.25e-16WRKY family protein