PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0070s0083.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | LFY | ||||||||
Protein Properties | Length: 256aa MW: 28352.5 Da PI: 8.2926 | ||||||||
Description | LFY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FLO_LFY | 41.4 | 2.4e-13 | 148 | 217 | 42 | 114 |
FLO_LFY 42 aaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslseifrldllvGeryGikaavr 114 + a + +le +f+++Gvr t+aki+elGft +t++ +el l +s+ + ++ l vGe +Gik a + Sphfalx0070s0083.1.p 148 SGPAAPATDLETFFEGFGVREETIAKIKELGFTGKTFMSNL-DELPLLFESIKQ--HCHLTVGEEWGIKGAAK 217 222333669****************************9866.58999****998..67899********9965 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF01698 | 1.8E-7 | 155 | 217 | IPR002910 | Floricaula/leafy protein |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence Send to blast |
MVKVKGVEWN HVVVLKEPEK HGMATLVKCA HCQKEFQGNA MRIRAHLLGN KRSAGVSGCP 60 SCPEDAREEL RIVDQAKSLT KRKREARRGI RPSSATFENG TDNGLQQMEL MASLQKGEKT 120 QMEQAFRNMV FQTGAVPVNF VSVSPFKSGP AAPATDLETF FEGFGVREET IAKIKELGFT 180 GKTFMSNLDE LPLLFESIKQ HCHLTVGEEW GIKGAAKKWQ KDYSLVFAQP DGEKWQEPEN 240 GALNGCKELL CLPQS* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024369664.1 | 1e-131 | uncharacterized protein LOC112279448 | ||||
TrEMBL | A0A2K1KTT2 | 1e-130 | A0A2K1KTT2_PHYPA; Uncharacterized protein | ||||
STRING | PP1S140_156V6.1 | 1e-102 | (Physcomitrella patens) |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0070s0083.1.p |