PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0067s0113.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

Trihelix

Protein Properties

Length: 521aa MW: 58976.7 Da PI: 8.823

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0067s0113.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	50.8	4.3e-16	263	349	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 W+ v +L++++++++ +l+rg+l+ ++W e+++ + r+++r+ qCk+k+e+++k ++ +++ e+k +++s ++p+++++e Sphfalx0067s0113.1.p 263 WCSAGVACLLDLYEDKWVQLGRGNLRTTHWMEIAEELtkqCPRQLQRTGPQCKNKIEKMKKNFRTERAEEEKPGAPHS-KWPWYSRME 349 9999*******************************877789************************9866776.9*****8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:3.40.50.620	1.1E-41	16	205	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
SuperFamily	SSF52402	4.41E-32	26	200	No hit	No description
CDD	cd01713	7.94E-35	50	205	No hit	No description
Pfam	PF01507	5.3E-20	50	211	IPR002500	Phosphoadenosine phosphosulphate reductase
Pfam	PF13837	3.6E-17	262	351	No hit	No description
SMART	SM00595	0.0063	270	357	IPR006578	MADF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0008152	Biological Process	metabolic process
GO:0003824	Molecular Function	catalytic activity

Sequence ? help Back to Top
Protein Sequence Length: 521 aa Download sequence Send to blast
MTTASATFLR MNKTEVWKAV EETGDKRLQA RVKNAYSVIE RTLALYKTDE IVFAFSGGKD 60 STVLLHLLRA GYAALASGGD ADAALQYCIR TVYFKHPDAF PEIDAFTLET PSLYPLDMEV 120 VRAEFTPGID ALHKKKPIRA IFLGTRMGDP NMVGVGEFSP STFGWPPFMR VNPILDWTYR 180 DVWAFILACK VPYCRLYDQG YTSIGKLHDT LPNPALLVSK DKYKPAYLML DERLERAGRV 240 KVVSLQGRER ERYKDKVELD RVWCSAGVAC LLDLYEDKWV QLGRGNLRTT HWMEIAEELT 300 KQCPRQLQRT GPQCKNKIEK MKKNFRTERA EEEKPGAPHS KWPWYSRMER LLTGVIKQVE 360 KGGCLGHIPA AHCSSSSLDK ETLLQDAWRY PSPMPQSMQG CLQSPTRVSV HKVEDENGSY 420 STLPPTDMET WGNRPQEDNL VDNTSISKNK RSCKQASPSL AEAIQSLGEG LVKIECMRAE 480 MELKSREIFL QSQIQLASLF AKSSEEKKRK TTKHANMSTN *

Sequence ? help Back to Top

Protein Sequence Length: 521 aa Download sequence Send to blast

MTTASATFLR MNKTEVWKAV EETGDKRLQA RVKNAYSVIE RTLALYKTDE IVFAFSGGKD  60
STVLLHLLRA GYAALASGGD ADAALQYCIR TVYFKHPDAF PEIDAFTLET PSLYPLDMEV  120
VRAEFTPGID ALHKKKPIRA IFLGTRMGDP NMVGVGEFSP STFGWPPFMR VNPILDWTYR  180
DVWAFILACK VPYCRLYDQG YTSIGKLHDT LPNPALLVSK DKYKPAYLML DERLERAGRV  240
KVVSLQGRER ERYKDKVELD RVWCSAGVAC LLDLYEDKWV QLGRGNLRTT HWMEIAEELT  300
KQCPRQLQRT GPQCKNKIEK MKKNFRTERA EEEKPGAPHS KWPWYSRMER LLTGVIKQVE  360
KGGCLGHIPA AHCSSSSLDK ETLLQDAWRY PSPMPQSMQG CLQSPTRVSV HKVEDENGSY  420
STLPPTDMET WGNRPQEDNL VDNTSISKNK RSCKQASPSL AEAIQSLGEG LVKIECMRAE  480
MELKSREIFL QSQIQLASLF AKSSEEKKRK TTKHANMSTN *

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
2wsi_A	8e-20	50	241	55	305	FAD SYNTHETASE

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.2	9e-22	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Sphfalx0067s0113.1.p