PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0066s0066.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | LFY | ||||||||
Protein Properties | Length: 251aa MW: 27627.7 Da PI: 8.6196 | ||||||||
Description | LFY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FLO_LFY | 42.7 | 9.8e-14 | 163 | 224 | 50 | 114 |
FLO_LFY 50 eleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslseifrldllvGeryGikaavr 114 +le++f+++Gvr tvaki+e+Gft +t++ ++ +el l++s+ + ++dl +Ge +Gik a + Sphfalx0066s0066.2.p 163 NLENFFEGFGVRPETVAKIKEMGFTGQTFM-LNLDELPSLLESIKQ--QCDLTLGEEWGIKGAAK 224 8***************************87.56679*******998..69***********9865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF01698 | 6.4E-9 | 163 | 224 | IPR002910 | Floricaula/leafy protein |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence Send to blast |
MVKVKGVEWN HVVVVKEPEK HGMATLVRCA HCEKEFQGNA MRIRAHLVGN KRAAGVSGCP 60 SCPDKARQEL RLVDEAKSLT QRKREARSRR SSTRTTMSSS APSDHSPDNS GQPVDLMPSL 120 QKGEKMAVEH AFKSMVFQAG GLPLNFVNLS PCKAGPVMSP PINLENFFEG FGVRPETVAK 180 IKEMGFTGQT FMLNLDELPS LLESIKQQCD LTLGEEWGIK GAAKKLHKDH LPVFTQPDVE 240 KWPEPENAQS * |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024369664.1 | 1e-121 | uncharacterized protein LOC112279448 | ||||
TrEMBL | A0A2K1KTT2 | 1e-120 | A0A2K1KTT2_PHYPA; Uncharacterized protein | ||||
STRING | PP1S140_156V6.1 | 5e-90 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61850.1 | 5e-06 | floral meristem identity control protein LEAFY (LFY) |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0066s0066.2.p |