PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0065s0107.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family TALE
Protein Properties Length: 736aa    MW: 81050.8 Da    PI: 8.1187
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0065s0107.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox24.64.4e-086576892254
                           SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
              Homeobox  22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                           ++yp+ +++  LAk++ Lt +qV++WF N R +
  Sphfalx0065s0107.1.p 657 HPYPNDADKLLLAKQTCLTRSQVSNWFINARVR 689
                           79*****************************88 PP
2BELL57.63.1e-19514583372
                  BELL   3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                           + l  kk  L+ +l+eV+ r+k+y+e  +++++ F++ ag ++a+pY  lA +++S +Fr+++da  +q+
  Sphfalx0065s0107.1.p 514 ETLLLKKDDLMMILNEVEARHKRYREHFRVMMNNFNVHAGAETATPYLDLAFQTMSCQFRAVRDATNKQL 583
                           567789***********************************************************99986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005742.8E-4400581IPR006563POX domain
PfamPF075269.2E-22408578IPR006563POX domain
PROSITE profilePS5007111.58630693IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.603.4E-25632704IPR009057Homeodomain-like
CDDcd000865.86E-11633694No hitNo description
SMARTSM003892.6E-6633697IPR001356Homeobox domain
SuperFamilySSF466894.02E-16634701IPR009057Homeodomain-like
PfamPF059205.5E-15650689IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 736 aa     Download sequence    Send to blast
MATSERARER ASAETKNSSA STTRSREGRG KSRDGALVLQ ELRLFASLTM GGTVTDRPHV  60
FMVSGPKAEG TMPEPSSPFG LRTHDCNRDD DSGSAVFFST TASSSIQQAE AEKLYYVQTP  120
DFPHSCCSED ASGVTIVYTT AAPGSGDGGA ISSALVSSSH MIQEQGFVPF LPAQVSHETH  180
IIRDLQATIP VYAEQRSASV SLKAFTAAAA DQAYGNWWNG RNVNNDEVDQ AGTADNAPAA  240
ARASLYDLEQ LRHRGTLVGD GVHGLSLSLS SQYQPQNSES LHLQSGRHVL QCADVEMNSA  300
VSASISHAAT GGVAANNART EFSSRLCTAT AGEPKFARAS RFPTPVRKGN HASKAAIRYE  360
FELGNCGSSA GRAGEQLPPL HEIEFCSSGS RSSSPADTIS RITNCFPTSK FLRAAQELLV  420
EVCRVVPPPK RQKTVHNVQQ QQTDCWNMQA PRNYYSANIS VPAAGQAAPV VELASQEPAQ  480
MCQGISSPQV PLISYHAQYI TQSPVDAARK ENRETLLLKK DDLMMILNEV EARHKRYREH  540
FRVMMNNFNV HAGAETATPY LDLAFQTMSC QFRAVRDATN KQLRMVRRAL GEEHVFRAGS  600
GETSRHYQIP HDQWNCQQQA VQVMGTPQQH HSWRPQRGLP EHAVTILRDW MTKNFLHPYP  660
NDADKLLLAK QTCLTRSQVS NWFINARVRL WKPMVEEMYM EEQRIAAQEV NARRQLAETS  720
GVPSKSLELF RRKLY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16400.11e-54BEL1-like homeodomain 7