PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0063s0091.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

G2-like

Protein Properties

Length: 752aa MW: 80827.9 Da PI: 7.3705

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0063s0091.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.7	2e-31	468	521	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH++Fv+av+ LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Sphfalx0063s0091.1.p 468 PRMRWTTNLHQHFVHAVDLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 521 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	3.58E-15	465	521	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	9.3E-28	466	521	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	4.7E-23	468	521	IPR006447	Myb domain, plants
Pfam	PF00249	9.9E-7	469	520	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 752 aa Download sequence Send to blast
MRESGFNKFP SLLTQQQAAA TNNIPAAVAG GGEGPDLSLQ ISPPSSSYNQ QQQQASSCNG 60 GQLVFLARSP HEGVHGFDLW KRPHDQRSGS CCSDSDSNVS SPAAASGMMR SRHEAAASSL 120 GVAASTDLCL ANPSSFDSSF QQASDHGVGP LVMSSSPEMQ QMRAHGELFK PAGLHGRSSS 180 SSSSYHHHHH HHQLQHQQSS PPHDFLQELH DGRAVMEHQQ QQSKLLLLQR SGESALKSLH 240 LGAAPRDDEL LLPRTIYGKY SVESQASRSS NFSQTTGVET AAAAGGECRN QQQQLRLQQS 300 TGVYDRPHHQ QSPHSPPSFQ QQSTSCSRLG LASFQSNYSN VFSRSCYNSE SATTTTTQQQ 360 QQQQGFQDSR LQQQLQSARS GAGGGEQSHH ELYASSSSLH MHGGLQQSTA TPRQTNVGSI 420 VGTCSNSSIL QETNNPAAAL RAGGGGGGGG SRFMSSSKFP SKRSMRAPRM RWTTNLHQHF 480 VHAVDLLGGH ERATPKSVLE LMNVKDLTLA HVKSHLQMYR TVKTTDKPLT LSGHGHLSES 540 HHNSGRNSEE FLMAPGSSCN SSVENSTSGA AAYIPESPNY YPTVVDARAA LLSMQSNKSS 600 QESSSLWTTS SDRLNWSPKD IGKGDARQLN AELDGSAAIW ALHTPAFRSE VNGGLDLTLA 660 EQLKATHPSG QDNEIEGEWM ASTTTGSNKL PRLQFSPFAL SEFVSSHIII PSNIIPKMPN 720 LEFTLGRSGW NGAGPEHVAT DAPQELLLLK C*

Sequence ? help Back to Top

Protein Sequence Length: 752 aa Download sequence Send to blast

MRESGFNKFP SLLTQQQAAA TNNIPAAVAG GGEGPDLSLQ ISPPSSSYNQ QQQQASSCNG  60
GQLVFLARSP HEGVHGFDLW KRPHDQRSGS CCSDSDSNVS SPAAASGMMR SRHEAAASSL  120
GVAASTDLCL ANPSSFDSSF QQASDHGVGP LVMSSSPEMQ QMRAHGELFK PAGLHGRSSS  180
SSSSYHHHHH HHQLQHQQSS PPHDFLQELH DGRAVMEHQQ QQSKLLLLQR SGESALKSLH  240
LGAAPRDDEL LLPRTIYGKY SVESQASRSS NFSQTTGVET AAAAGGECRN QQQQLRLQQS  300
TGVYDRPHHQ QSPHSPPSFQ QQSTSCSRLG LASFQSNYSN VFSRSCYNSE SATTTTTQQQ  360
QQQQGFQDSR LQQQLQSARS GAGGGEQSHH ELYASSSSLH MHGGLQQSTA TPRQTNVGSI  420
VGTCSNSSIL QETNNPAAAL RAGGGGGGGG SRFMSSSKFP SKRSMRAPRM RWTTNLHQHF  480
VHAVDLLGGH ERATPKSVLE LMNVKDLTLA HVKSHLQMYR TVKTTDKPLT LSGHGHLSES  540
HHNSGRNSEE FLMAPGSSCN SSVENSTSGA AAYIPESPNY YPTVVDARAA LLSMQSNKSS  600
QESSSLWTTS SDRLNWSPKD IGKGDARQLN AELDGSAAIW ALHTPAFRSE VNGGLDLTLA  660
EQLKATHPSG QDNEIEGEWM ASTTTGSNKL PRLQFSPFAL SEFVSSHIII PSNIIPKMPN  720
LEFTLGRSGW NGAGPEHVAT DAPQELLLLK C*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	9e-17	469	523	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	9e-17	469	523	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	9e-17	469	523	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	9e-17	469	523	3	57	Protein PHOSPHATE STARVATION RESPONSE 1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	2e-36	G2-like family protein

Link Out ? help Back to Top
Phytozome	Sphfalx0063s0091.1.p