PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0062s0078.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | bHLH | ||||||||
Protein Properties | Length: 728aa MW: 78805.6 Da PI: 5.1887 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.9 | 2.4e-10 | 535 | 580 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+ +Er RR++ N+++++L +l+P kK + +++L +A++YI++L+ Sphfalx0062s0078.2.p 535 HKLAERSRRNNFNEKLHTLCTLIPII-----KKKDRVSVLAHAIDYIHQLK 580 99***********************7.....699***************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 13.446 | 530 | 579 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 6.28E-14 | 533 | 594 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 3.3E-8 | 535 | 579 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.71E-10 | 535 | 584 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 2.0E-13 | 535 | 589 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.3E-10 | 536 | 585 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 728 aa Download sequence Send to blast |
MQGVTPQLDS RMSEDQISQK RLKALVQSLE WTYGVVWKLS SSDGLLEWVH GWFNPLSAES 60 AQTLMPQFYS IFKDPCALGF SALALQQGSP VWWTSNMAEI RTDKYKAQFL REAHIQTVVC 120 IPGLGADGMY CTELATTDLV PETDALMNSL QDYVSTSVKP HMLGVIESPL PSSLSPLNPG 180 GQGDLSSDQF SSLGVTCPLN PGTPSAQITS PGSSGTGFNP SLNVNRYAPP GDFNECLGNS 240 GTVLRDEEPY FLWTAPGNQS LFFDYGFPSG LFDEIDIDVD VEKTMFNSLE SKKATKSSSN 300 PDMMTSCKWD SDTLDSKEVE LKAMTMPEFT ASCVEHSSCK KSVSLPATNA QDLLDLLAGN 360 KPCDPPATKS TSTVSRETDK QFSSFSHLLE ASCSYSTPEA PLKTSDQATS SIDPFYLQQS 420 TDMSFIKDLV GQPNNVTNLL MDVHSCKPAL PASNFRHVHE SLFKRRICSK LAMHGGDSRS 480 SQQSLLQQWT EKIVPMIKEA QKLADQGLTR SCGTLSSGEC GRMPNPAHDE AAHVHKLAER 540 SRRNNFNEKL HTLCTLIPII KKKDRVSVLA HAIDYIHQLK TQVAHLEEAG GPLSKQGKGT 600 DHSQSPASTI SIQAQEDSTL DVSSSLGSVR KVAVCPDNGG VVINVEANNQ TDTLIRILMA 660 SSDLGLEVRS VNSTCINNEV HVAVNAVAGG VHGMSSMNVQ EALQRVLIPS NTSLSTVTSD 720 MDHLGDG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63650.3 | 1e-10 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0062s0078.2.p |