PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0059s0078.2.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family bHLH
Protein Properties Length: 494aa    MW: 53376.4 Da    PI: 7.2831
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0059s0078.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.82.2e-09244289454
                           HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                   HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                            h  rEr+RRd++ ++f+ L +llP++      K + ++i+    +Y+k+L
  Sphfalx0059s0078.2.p 244 DHILRERQRRDEMSNKFAVLESLLPPS-----SKRDRSTIVSDSADYVKNL 289
                           6999*********************98.....699**************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.678240289IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-6244289IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.2E-11244301IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.31E-9245293No hitNo description
SuperFamilySSF474591.23E-11245305IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.7E-7246295IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 494 aa     Download sequence    Send to blast
MEYSSLDLHS TTGQFDKHTD FAGSYPFVDS CVNNAGLEMV GGSQFRAMCQ NPYRWSDSAS  60
SCLQWAKVQA GEPLLSHTSS SSVPGASPSA AAVVPSVSVA ADVDPRGQQF EVFSPSFPDE  120
VPAFSVQLGA SFPSPQSACR QRMAPFPTTR QLELVSVVGK SSYDNNTPAA AAFVESSSQY  180
RANVGVDRWG GESVPSPAVS KRVRDKFTDP HKVQQRIRKA EKNLGCSLPQ GAGAKPKVTL  240
EHADHILRER QRRDEMSNKF AVLESLLPPS SKRDRSTIVS DSADYVKNLH HRIGVLQQRR  300
IKMAAAAGAT TTEASPAPHH GSPILAPSTS AWNPLSPPVQ TLQSSPDSAA LCLKQSNPKK  360
LMEDQVCQDQ DSKKSSSCFP TEQELREINL VLKSCVEKLE VCLDLPHKIF IHMICRPQER  420
FQSNVLQGIE SLNLEVLQCN ISSVVASVIC IISAKPWDIP AYDALCKDDI IAAVHSALGP  480
DAMVGAITLQ KGL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46510.16e-09ABA-inducible BHLH-type transcription factor