PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0059s0014.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

G2-like

Protein Properties

Length: 766aa MW: 81816.3 Da PI: 6.8945

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0059s0014.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.7	4.8e-32	119	172	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWt +LH++Fv+a+e+LGG+++AtPk +l+lm+vkgLt++hvkSHLQ+YR+ Sphfalx0059s0014.1.p 119 PRLRWTADLHHCFVHAIERLGGQDRATPKLVLQLMEVKGLTIAHVKSHLQMYRS 172 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	5.9E-31	115	173	IPR009057	Homeodomain-like
PROSITE profile	PS51294	11.711	115	175	IPR017930	Myb domain
SuperFamily	SSF46689	1.36E-14	117	172	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	5.7E-23	119	173	IPR006447	Myb domain, plants
Pfam	PF00249	2.0E-7	120	171	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 766 aa Download sequence Send to blast
MQPKEERSNG SNEEEKVAGG NANSRKRSRH ASSSLSGGDE EEEYHHVVEQ SSESYNTAAT 60 GHGHGSSPGT AAAGRNHSCS HEEGGSYSSA AGGGGGGAGA AGSCRPGGTV RQYVRSKMPR 120 LRWTADLHHC FVHAIERLGG QDRATPKLVL QLMEVKGLTI AHVKSHLQMY RSMKIDENGH 180 SGGLPGAHDD PHQGLEFQDH AFDVGSCSFQ LMNPAASRSL FPAAGQTIDL HLGTSGNKSR 240 AAAGAFLQSE VTDFSPQRNI MISNFLQCHP PAPGVHVQHQ SDRLELDRRH LTMSLQRHDD 300 GRGGEWLQRP AAGVPTGIEI RSTATTAAGL IRDSWPHHGD QEKNEIVVNW ATRAGCQQAA 360 ALKAAVNGIT TSLQPGGAHS MQHLRTQQLV DEWSRKPSPA AVRLQADWDQ RQQVNHEAGG 420 GRAVAAHHES MQHQPLHLAM SQPATPAQGA GGPLKKQQRI TDHSREWERL CRGSSEHEGA 480 AVRPRMEWGS KITLDQGHRG GDGYASTSTA ASSIVSPFHL RQLLDSSCGS SNLQATGEVE 540 QRAAWSESQH GELLVAGGGT GQIISGWNMS EVQRKMALSA NPLQIRVGSL EKAEGDHGVE 600 SKSRFSAGGP PEYDPHPAAA IRRPWATTKM ETSLEAGRFW RAEEAAGAQS TTDHDPCGDQ 660 NLMQQQQDQQ LDTTTTTELS LSPFSSRGTK SCSPPAAAAA SCRMTKVTTL SLVPPGLTNE 720 TVESASADCD LSLQQQQSEM SDAVVNLQVP PKGITLDLTM SIGRP*

Sequence ? help Back to Top

Protein Sequence Length: 766 aa Download sequence Send to blast

MQPKEERSNG SNEEEKVAGG NANSRKRSRH ASSSLSGGDE EEEYHHVVEQ SSESYNTAAT  60
GHGHGSSPGT AAAGRNHSCS HEEGGSYSSA AGGGGGGAGA AGSCRPGGTV RQYVRSKMPR  120
LRWTADLHHC FVHAIERLGG QDRATPKLVL QLMEVKGLTI AHVKSHLQMY RSMKIDENGH  180
SGGLPGAHDD PHQGLEFQDH AFDVGSCSFQ LMNPAASRSL FPAAGQTIDL HLGTSGNKSR  240
AAAGAFLQSE VTDFSPQRNI MISNFLQCHP PAPGVHVQHQ SDRLELDRRH LTMSLQRHDD  300
GRGGEWLQRP AAGVPTGIEI RSTATTAAGL IRDSWPHHGD QEKNEIVVNW ATRAGCQQAA  360
ALKAAVNGIT TSLQPGGAHS MQHLRTQQLV DEWSRKPSPA AVRLQADWDQ RQQVNHEAGG  420
GRAVAAHHES MQHQPLHLAM SQPATPAQGA GGPLKKQQRI TDHSREWERL CRGSSEHEGA  480
AVRPRMEWGS KITLDQGHRG GDGYASTSTA ASSIVSPFHL RQLLDSSCGS SNLQATGEVE  540
QRAAWSESQH GELLVAGGGT GQIISGWNMS EVQRKMALSA NPLQIRVGSL EKAEGDHGVE  600
SKSRFSAGGP PEYDPHPAAA IRRPWATTKM ETSLEAGRFW RAEEAAGAQS TTDHDPCGDQ  660
NLMQQQQDQQ LDTTTTTELS LSPFSSRGTK SCSPPAAAAA SCRMTKVTTL SLVPPGLTNE  720
TVESASADCD LSLQQQQSEM SDAVVNLQVP PKGITLDLTM SIGRP*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	5e-16	120	174	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	5e-16	120	174	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	5e-16	120	174	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	5e-16	120	174	3	57	Protein PHOSPHATE STARVATION RESPONSE 1

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00301	DAP	Transfer from AT2G40260	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	7e-31	G2-like family protein

Link Out ? help Back to Top
Phytozome	Sphfalx0059s0014.1.p