PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0057s0048.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | VOZ | ||||||||
Protein Properties | Length: 244aa MW: 27301.1 Da PI: 4.5248 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 117.4 | 1.5e-36 | 129 | 229 | 93 | 202 |
VOZ 93 aelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldala 181 a+lfd+++l+ge ++e lffdkp afesg kq gwh srkqvmkefggl syymdpqp++ fe hl+eye+++ ++a Sphfalx0057s0048.1.p 129 ADLFDVAILHGEVLQERLFFDKPCCAFESGPWKQ---------GWHGSRKQVMKEFGGLNCSYYMDPQPMGLFERHLFEYELSSWTDCA 208 68*****************************998.........9********************************************* PP VOZ 182 lyrlelklvdekksakgkvsk 202 ly+lelk+vd+ k + ++v Sphfalx0057s0048.1.p 209 LYKLELKQVDASKKNLSQVEG 229 ***********9999888865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence Send to blast |
MHQMLQEWKV ELHETSLASS LLAKPNSSEL SSNMEWLLQL NNEKDDSSSI TLTPPMTNLP 60 LEVANIFPPS IAFLNPKCAL WDCPRPAQGG DEGLVYCSSF HEELALSEGA PGMCLVLRPG 120 GIDLKDTFAD LFDVAILHGE VLQERLFFDK PCCAFESGPW KQGWHGSRKQ VMKEFGGLNC 180 SYYMDPQPMG LFERHLFEYE LSSWTDCALY KLELKQVDAS KKNLSQVEGQ NMFPSLVDSR 240 NSS* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024378749.1 | 4e-66 | transcription factor VOZ1-like isoform X1 | ||||
Refseq | XP_024378752.1 | 1e-66 | transcription factor VOZ1-like isoform X3 | ||||
Swissprot | Q9SGQ0 | 5e-55 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | V6BQR5 | 1e-66 | V6BQR5_9BRYO; Vascular plant one zinc finger transcription factor protein (Fragment) | ||||
STRING | PP1S113_68V6.1 | 1e-65 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 2e-57 | vascular plant one zinc finger protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0057s0048.1.p |
Publications ? help Back to Top | |||
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