PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0048s0100.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

BES1

Protein Properties

Length: 434aa MW: 44801 Da PI: 7.8626

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0048s0100.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	168	5.3e-52	2	102	1	100
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasas 89 ++++r ptwkErEnnkrRERrRRaiaaki+aGLR +Gnyklpk++DnneVlkALc+eAGw+v++DG tyrkg+kp+ +++aa +++ Sphfalx0048s0100.1.p 2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRTYGNYKLPKHCDNNEVLKALCAEAGWIVDEDGSTYRKGTKPPAATAAAALDHHQM 90 5899************************************************************************5555555555555 PP DUF822 90 pesslq.sslks 100 s++ s+ s Sphfalx0048s0100.1.p 91 EVSPSPsVSPAS 102 555544244444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	3.1E-49	3	100	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence Send to blast
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRTYGNY KLPKHCDNNE VLKALCAEAG 60 WIVDEDGSTY RKGTKPPAAT AAAALDHHQM EVSPSPSVSP ASSYPGAGDG TSLIPWLKGL 120 SSAAAGGGGG GGSGTTSTSS SAGLPPLHVM QYGNSSSAPV TPPLSSPTTR GTLPAVKPDW 180 DAIAKDGVPP TPKPCPTHAF SQAVNAWSAH HHHPSFLAAA AIHAASNQQT SHLQQQQCVP 240 VSLCDTPDGC HTPVADAEVE SGFSLVATDA ALEFANMGSS SFTKWANGIR VHTGPVGSAL 300 GLSTTGAAAA AAAASSCHMI LGGMGLGPFP TSAQTETAQE TPYYNPWHGS GSGGGGPMQF 360 ASSMHCTGPL TAPRLLNPSR TAADKFGIDL ESTHVQDLSW NARENMVLGM SRKVPDELEL 420 TLGSSSLRAS PAR*

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence Send to blast

MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRTYGNY KLPKHCDNNE VLKALCAEAG  60
WIVDEDGSTY RKGTKPPAAT AAAALDHHQM EVSPSPSVSP ASSYPGAGDG TSLIPWLKGL  120
SSAAAGGGGG GGSGTTSTSS SAGLPPLHVM QYGNSSSAPV TPPLSSPTTR GTLPAVKPDW  180
DAIAKDGVPP TPKPCPTHAF SQAVNAWSAH HHHPSFLAAA AIHAASNQQT SHLQQQQCVP  240
VSLCDTPDGC HTPVADAEVE SGFSLVATDA ALEFANMGSS SFTKWANGIR VHTGPVGSAL  300
GLSTTGAAAA AAAASSCHMI LGGMGLGPFP TSAQTETAQE TPYYNPWHGS GSGGGGPMQF  360
ASSMHCTGPL TAPRLLNPSR TAADKFGIDL ESTHVQDLSW NARENMVLGM SRKVPDELEL  420
TLGSSSLRAS PAR*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	2e-21	6	76	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	2e-21	6	76	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	2e-21	6	76	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	2e-21	6	76	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024362740.1	1e-83	protein BZR1 homolog 1-like
TrEMBL	A9TVH7	3e-82	A9TVH7_PHYPA; Predicted protein
STRING	PP1S335_68V6.1	5e-83	(Physcomitrella patens)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	3e-29	BES1/BZR1 homolog 4

Link Out ? help Back to Top
Phytozome	Sphfalx0048s0100.1.p