PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0045s0049.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family WRKY
Protein Properties Length: 617aa    MW: 66921.4 Da    PI: 6.4201
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0045s0049.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY69.64.4e-22392450259
                           --SS-.EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                  WRKY   2 dDgyn.WrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                           dDg++ W+KYG K++++++f r+YY+C+ ++C++kk v+ +++dp ++++tY g+H+++
  Sphfalx0045s0049.1.p 392 DDGHRgWKKYGNKVIQNANFCRGYYKCSIKNCNAKKMVQPTDKDPAIFQVTYVGKHTCS 450
                           688866***************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.8E-23386451IPR003657WRKY domain
PROSITE profilePS5081116.857386452IPR003657WRKY domain
SuperFamilySSF1182901.7E-20390450IPR003657WRKY domain
SMARTSM007743.6E-24391451IPR003657WRKY domain
PfamPF031067.8E-20392449IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 617 aa     Download sequence    Send to blast
MENRPSFGRG MLRLGGGNWS EAQCVEKVEE MLSRAIIHQE DLWGMLMLHS PAADPGAMGG  60
PEQQQQAVIP PMVLRALMAK LENSMDWCHL ALCRLKEILS NSPCPPPASL AAAARSSREL  120
AATTFRDYEP AKPIQQPQQL IVSKPSPSSS SKLKQHTPLS QIHVPLREES LSSSPHPLTA  180
GLQPSSCFSA GESGPSTVTD SPWSYLFRAT PKASSAPPAT RDDDQSALTL ESLDLHEDST  240
HQGQQSAQHM HFVMNSESSD PWNCTDIISQ PTFTHKSKVD YPGRALNHLP RETSFSCRVD  300
AFAAPSCSTA GADAEAAKRQ LRGKAQNSEI AALEGGIELG STASHSSDLQ DRSRRNTVRP  360
KREREATAEE EKSEVQYQRL RPGLDAKKGI PDDGHRGWKK YGNKVIQNAN FCRGYYKCSI  420
KNCNAKKMVQ PTDKDPAIFQ VTYVGKHTCS SAHPRKRQPR ANVMAGATTF VAAGDQAAAA  480
QLLASSSDPH AAADQRSLLG GTVAGAGTPE RTDMVSSMDT LPSNVTAESL SEQWQVLIGS  540
HETAATTTTR VTMTGGSDLE SVEGRGSTDT TSWSSDDDWK NFASEDVDQN DIYSYFDRNS  600
DQGVNITEPV QQPRYL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.22e-15WRKY family protein