PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0043s0114.2.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family GATA
Protein Properties Length: 217aa    MW: 23462.4 Da    PI: 7.3554
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0043s0114.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA627.3e-205993135
                  GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                          C++Cgt+kTplWR+gp+g+k+LCnaCG++++k g+
  Sphfalx0043s0114.2.p 59 CAHCGTSKTPLWRNGPQGPKSLCNACGIRHKKAGR 93
                          ********************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF577161.43E-145294No hitNo description
SMARTSM004011.1E-1953105IPR000679Zinc finger, GATA-type
PROSITE profilePS5011413.65392IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.108.7E-185793IPR013088Zinc finger, NHR/GATA-type
CDDcd002026.92E-155893No hitNo description
PfamPF003209.3E-185993IPR000679Zinc finger, GATA-type
PROSITE patternPS0034405984IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MLESHSSYGS LQACQSWLPD FLTATNPSAA AAGGKVQRAQ VQQANRCLQE CNDEEERVCA  60
HCGTSKTPLW RNGPQGPKSL CNACGIRHKK AGRRSAALVS SEFEDGHSII AGAGKGGKRK  120
LEQVLGQQYW MYQQAQKQRG EVYARPRDSL LSSGASCITW QQSLLPSAQS PLQHNCHQPL  180
PSIQEEDMLE MCAFASDEEE GAALLMALSH SGCLKC*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.13e-17GATA transcription factor 15