PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0040s0035.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | G2-like | ||||||||
Protein Properties | Length: 497aa MW: 53535 Da PI: 6.8233 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.3 | 6e-32 | 303 | 358 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+p+LH+rFv++++qLGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ Sphfalx0040s0035.1.p 303 KARRCWSPDLHQRFVHVLQQLGGSQVATPKQIRELMNVDGLTNDEVKSHLQKYRLH 358 68****************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 12.956 | 300 | 360 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.7E-28 | 301 | 361 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 8.51E-17 | 301 | 361 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.3E-25 | 303 | 358 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 2.5E-7 | 305 | 356 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009266 | Biological Process | response to temperature stimulus | ||||
GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway | ||||
GO:0010452 | Biological Process | histone H3-K36 methylation | ||||
GO:0048579 | Biological Process | negative regulation of long-day photoperiodism, flowering | ||||
GO:1903507 | Biological Process | negative regulation of nucleic acid-templated transcription | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 497 aa Download sequence Send to blast |
MGISSDLSLG CHTQALSCAS TITSLKVSLP ELEENQLGGH LHALEDERQK IEAFKRELPL 60 CMQLLEEAIA KLKEQLEEVQ PAPGTPQPLQ LRCSTPEKSS NGNNMLVLKE FMPLKKRQCQ 120 SLRKEEVGND LQGDQPVEQP RGIDIGRPAL MAEAQLWTQQ VATSAAHIER GALPEEQCGP 180 LESGLAEQAN SSIRSSRGLL SSKQRSTGAF LPFTRKQVNV PMLSQSDHVT SNGGNLSLSY 240 ANPLPGFQAQ AFPVAEPELG SIDAGPSPQK LDAPGCMKSG PFSNGVLGAG STCSAGGSQS 300 HRKARRCWSP DLHQRFVHVL QQLGGSQVAT PKQIRELMNV DGLTNDEVKS HLQKYRLHTR 360 RPSPPPQTAS APTPQLVVLG SIWGSDPDYM AGSTAQTAVE VHDPSPRHPR QQYASYCKPS 420 VQQDQFAHFN NGRSENKQQL QESVCVKSQQ AVSQSQTSPQ GCLQITNQLS GSAGYQDDSG 480 GEDAKPDIAP VGKDRG* |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00261 | DAP | Transfer from AT2G03500 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03500.1 | 1e-49 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0040s0035.1.p |