PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0038s0007.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

NAC

Protein Properties

Length: 550aa MW: 61128.7 Da PI: 5.5964

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0038s0007.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	100.7	2e-31	45	195	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.......lelee...v.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra 77 lppG+rF+P+deel+ e+L +kv g + + + +++ +i++++P++Lp vk++ + +++F + + +y+tg+rk+r+ Sphfalx0038s0007.1.p 45 LPPGVRFNPSDEELL-EHLLAKVGGCGsakehplI---DdfiMtLDKEdGICRTHPENLP-GVKKDGSACHYFYRPSMAYTTGTRKRRK 128 79***********.6666666665534454442...133333554436******.677888999**************8 PP NAM 78 ..............tksgyWkatgkdkevlskkgelvglkktLvfy...kgrapkgektdWvmheyrl 128 ++ +W++tgk++++l+ +g+ g kk++v+y g+++k +kt+Wvmh+y+l Sphfalx0038s0007.1.p 129 iqteygiqgdlpcqGEEVRWHKTGKTRPILQ-DGAIQGFKKIMVLYrtsLGKKSKNVKTNWVMHQYHL 195 7999999999888766899********.999*******5554899999********98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.22E-36	37	214	IPR003441	NAC domain
PROSITE profile	PS51005	32.002	45	214	IPR003441	NAC domain
Pfam	PF02365	4.1E-14	46	195	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence Send to blast
MASQRECSRI KQQMHYASSC DNEYLCPTCG QTVGQLKVRV DWTVLPPGVR FNPSDEELLE 60 HLLAKVGGCG SAKEHPLIDD FIMTLDKEDG ICRTHPENLP GVKKDGSACH YFYRPSMAYT 120 TGTRKRRKIQ TEYGIQGDLP CQGEEVRWHK TGKTRPILQD GAIQGFKKIM VLYRTSLGKK 180 SKNVKTNWVM HQYHLGKHEE ERDGEIVVCK VFLQKQPRRS TGLPAPGHGQ KMVLLSPIDD 240 QDDDLGSEAA SESNSGFQEL LLPSPGFKSV NVDSPISVSG VTREILPTTP KLYARSARLQ 300 GNHSKAEPTE STIPGIISLA QSFEQHDPRL AIQHIPESLV EVMTSDVNNT PDNSFGGHHG 360 NPKAFKEVPA AGTLAPNKIT NLVEVQLPTS ILLPATEHIM VDTHDSIVAG NLLLTHCELP 420 GEVESFQTII NLDDEDQLPH WEAIDPEGQA VSVEDSDLND CDHERLAFQV HCSERINAAN 480 RPLLQKALSF GDHNWQRYCH DAFDHVGHIL DDQEIDETIH EVDPALHNIV LDTPPDMFEY 540 PNVSSSNRK*

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence Send to blast

MASQRECSRI KQQMHYASSC DNEYLCPTCG QTVGQLKVRV DWTVLPPGVR FNPSDEELLE  60
HLLAKVGGCG SAKEHPLIDD FIMTLDKEDG ICRTHPENLP GVKKDGSACH YFYRPSMAYT  120
TGTRKRRKIQ TEYGIQGDLP CQGEEVRWHK TGKTRPILQD GAIQGFKKIM VLYRTSLGKK  180
SKNVKTNWVM HQYHLGKHEE ERDGEIVVCK VFLQKQPRRS TGLPAPGHGQ KMVLLSPIDD  240
QDDDLGSEAA SESNSGFQEL LLPSPGFKSV NVDSPISVSG VTREILPTTP KLYARSARLQ  300
GNHSKAEPTE STIPGIISLA QSFEQHDPRL AIQHIPESLV EVMTSDVNNT PDNSFGGHHG  360
NPKAFKEVPA AGTLAPNKIT NLVEVQLPTS ILLPATEHIM VDTHDSIVAG NLLLTHCELP  420
GEVESFQTII NLDDEDQLPH WEAIDPEGQA VSVEDSDLND CDHERLAFQV HCSERINAAN  480
RPLLQKALSF GDHNWQRYCH DAFDHVGHIL DDQEIDETIH EVDPALHNIV LDTPPDMFEY  540
PNVSSSNRK*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	3e-14	45	195	15	140	Stress-induced transcription factor NAC1

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	2e-70	NAC domain containing protein 75

Link Out ? help Back to Top
Phytozome	Sphfalx0038s0007.1.p