PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0036s0138.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

C2H2

Protein Properties

Length: 1005aa MW: 113265 Da PI: 6.6294

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0036s0138.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.7	0.00019	114	135	3	23
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 Cp C k+F ++++L Hi + H Sphfalx0036s0138.1.p 114 CPFCEKMFESSYYLDFHIARrH 135 ******************9988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE pattern	PS00028	0	114	135	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 1005 aa Download sequence Send to blast
MEVEQSKHAA TLTKKSDNLE RERERAHFEI LGLTKICLFS NGFVWSVLLH HQKQISYICT 60 EVMRHHTESE WFWTGTEIAH VFFGGCQTMK TYEVMLKMQG KCHMQSNTQQ VRHCPFCEKM 120 FESSYYLDFH IARRHPKTQE IIMEDKLLEV VSKAEEATAA RLKAETAIAM QTEIQQLREK 180 SQVDLQRAEM SANAQVKTLQ AELRQSNVQL QELQSCLQLL QSQFLSAPQP KATRYVQYTS 240 DLVKEKDSGP EQERLYELET KFTALECQVK SLGQENLRLL KELDTAYNEV SDLRSGKEHS 300 LAKLEIRVGE LRMENQHLKK TMHKMEGEQF EMILKGKHEG GMSAEKRSRT PDTDQALLAL 360 ARPISGRQRQ ELFMERLEKT RSPDSSPEKE KHRHSSSPAK QVSRAAAHLE QAYETSLDRK 420 GLRSNPLQEK SRHSQESQSW VKNCRQPQNA EELKAQLEED MLTAHAEEER RKKAVQRLLL 480 KEKGKDRAHD SNTRKVQRRQ DKDDGLHSYT HRTKSEAHGG SEEDYERHAI EQEDEEAHKF 540 AEIAEVAAMD VGEEAPVIAI PEKQKWLKEH PYVPIPTLPH VVAKYPHPPS AFKATFNEIA 600 HQFDEQLHQE LKKFGITPTA SGISDTAYTS VSMALEKQRS QRMAQVHGSE RRLMEYERGA 660 ILWHTQRAVH DRDLEIIEAH FDIATECSSG HQTGDSDGNE SEQSNYSSSR SHQSESSKGS 720 DGSREAEEEK ERDKKSSKAK NSGYDEKDHV SGGSSSGHSN EQSNVGGGSS SSEKETKNSS 780 KTQATQNAKS PPDRRVQYVS NAFSSKSMQK RGGGKGETDL PPSRGELIIM PPKNAIEENL 840 MQKMTATTMQ TVEEEAEDVE EELGLGNWDS EDDEHDASSS LVRSSQRKIV NGHPEAVSVL 900 SALKGKDGPA AHECSSSSPL QTKTPPTRKS ISPLKAHIHS MSSTTLSPPR AQPKASPPMS 960 SLPQKSNPDR VRSKGNAVDI DSNGSEERKI MNELTSEIDE IISS*

Sequence ? help Back to Top

Protein Sequence Length: 1005 aa Download sequence Send to blast

MEVEQSKHAA TLTKKSDNLE RERERAHFEI LGLTKICLFS NGFVWSVLLH HQKQISYICT  60
EVMRHHTESE WFWTGTEIAH VFFGGCQTMK TYEVMLKMQG KCHMQSNTQQ VRHCPFCEKM  120
FESSYYLDFH IARRHPKTQE IIMEDKLLEV VSKAEEATAA RLKAETAIAM QTEIQQLREK  180
SQVDLQRAEM SANAQVKTLQ AELRQSNVQL QELQSCLQLL QSQFLSAPQP KATRYVQYTS  240
DLVKEKDSGP EQERLYELET KFTALECQVK SLGQENLRLL KELDTAYNEV SDLRSGKEHS  300
LAKLEIRVGE LRMENQHLKK TMHKMEGEQF EMILKGKHEG GMSAEKRSRT PDTDQALLAL  360
ARPISGRQRQ ELFMERLEKT RSPDSSPEKE KHRHSSSPAK QVSRAAAHLE QAYETSLDRK  420
GLRSNPLQEK SRHSQESQSW VKNCRQPQNA EELKAQLEED MLTAHAEEER RKKAVQRLLL  480
KEKGKDRAHD SNTRKVQRRQ DKDDGLHSYT HRTKSEAHGG SEEDYERHAI EQEDEEAHKF  540
AEIAEVAAMD VGEEAPVIAI PEKQKWLKEH PYVPIPTLPH VVAKYPHPPS AFKATFNEIA  600
HQFDEQLHQE LKKFGITPTA SGISDTAYTS VSMALEKQRS QRMAQVHGSE RRLMEYERGA  660
ILWHTQRAVH DRDLEIIEAH FDIATECSSG HQTGDSDGNE SEQSNYSSSR SHQSESSKGS  720
DGSREAEEEK ERDKKSSKAK NSGYDEKDHV SGGSSSGHSN EQSNVGGGSS SSEKETKNSS  780
KTQATQNAKS PPDRRVQYVS NAFSSKSMQK RGGGKGETDL PPSRGELIIM PPKNAIEENL  840
MQKMTATTMQ TVEEEAEDVE EELGLGNWDS EDDEHDASSS LVRSSQRKIV NGHPEAVSVL  900
SALKGKDGPA AHECSSSSPL QTKTPPTRKS ISPLKAHIHS MSSTTLSPPR AQPKASPPMS  960
SLPQKSNPDR VRSKGNAVDI DSNGSEERKI MNELTSEIDE IISS*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Link Out ? help Back to Top
Phytozome	Sphfalx0036s0138.1.p