PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0034s0137.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family Trihelix
Protein Properties Length: 440aa    MW: 50250.3 Da    PI: 6.7271
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0034s0137.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.91.4e-0976156167
              trihelix   1 rWtkqevlaLiearr..............emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 
                           +Wt+  v++Li   r              ++e+  r ++++k+ W+ v+++mr  g +  + qCk k++ l+ +y  ++++
  Sphfalx0034s0137.1.p  76 QWTDPAVKVLIYSLRllrissgmydddlvDKETGRRPSRSNKQIWKLVASAMRVLGHNFDAGQCKTKFKGLKSEYSTTAQN 156
                           7**********9999999*******99987788888899************************************999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138373.9E-976156No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MVVAGGSALT LGLNPTVNGE MQLHPHPPAH GCVSDQEVSQ DDDDSQGLVE AGDQANPAGR  60
ENHARKRRHR RLDVAQWTDP AVKVLIYSLR LLRISSGMYD DDLVDKETGR RPSRSNKQIW  120
KLVASAMRVL GHNFDAGQCK TKFKGLKSEY STTAQNLGFS GGSHAAVPGN WEEISNASEE  180
NREKTHKFKF FGDMRGYFAG SPVPNPESLF SAEKAEEFMK ILETVKHDLD LGRREGLDKE  240
KCSINKGLAA DCQGTGRSEG NFLKRNPVRA IGKPPVPQPV WTTNHLTDES LHQEETDVQQ  300
LQGSFGDTRK RKDSMMEKEA ELKEEYRAKK LQLKYRQLQL AEKIYDLQVR KIEQEEQQLR  360
LEENNYQLQL RKAEHEMQHS TRKLELETRQ LDMEERRLKQ QEEHFMILQS CRINEREHMD  420
ESAARHGEQD RQQWVEIVG*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-