PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0033s0162.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | VOZ | ||||||||
Protein Properties | Length: 462aa MW: 50760.3 Da PI: 7.3428 | ||||||||
Description | VOZ family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | VOZ | 362.3 | 1.8e-111 | 185 | 403 | 1 | 217 |
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaataksp 89 pp afl+pkcalwdc+rpaqg ++ ycssfh++lal eg+pg+ pvlrp+gidlkdg+lfaal+a+v+g+ vgipe +gaat+k+p Sphfalx0033s0162.1.p 185 PPSIAFLNPKCALWDCPRPAQGGNEGLVYCSSFHEELALSEGAPGMCPVLRPGGIDLKDGPLFAALTARVNGRAVGIPELHGAATSKTP 273 66779************************************************************************************ PP VOZ 90 wnaaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineld 178 wna++lfd+++l+ge +rewlffdkprrafesg rkqrslpdy grgwhesrkqvmkefgglkrsyymdpqp + fewhl+eye+++ Sphfalx0033s0162.1.p 274 WNATDLFDMAILHGEVLREWLFFDKPRRAFESGTRKQRSLPDYGGRGWHESRKQVMKEFGGLKRSYYMDPQPEGLFEWHLFEYELSSRT 362 ***************************************************************************************** PP VOZ 179 alalyrlelklvde.kksakgkvskd.sladlqkklgrlta 217 ++alyrlelk+vd+ kk+ k+k ++d s+a lq+++grl+a Sphfalx0033s0162.1.p 363 DCALYRLELKQVDAsKKTGKAKAQTDpSIASLQHQIGRLSA 403 ************9538999***9988359**********97 PP |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009408 | Biological Process | response to heat | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009631 | Biological Process | cold acclimation | ||||
GO:0009816 | Biological Process | defense response to bacterium, incompatible interaction | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0048578 | Biological Process | positive regulation of long-day photoperiodism, flowering | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 462 aa Download sequence Send to blast |
MAAKHKASRG SQHFRAKATN RVDDLQGMVS ELQQARRQNR LKDVALLEEQ MHQMLREWKA 60 ELREASPASS LLSLQAEPSS SELSSDMERL LQLNNEDDDA SSIALTPSPT TNLPLEAAGT 120 STSQKDCGVS VPELCEIPIP SEGGIEHQAG PTSRKCDDIS YRPVQHNHQT PIATSDMLFK 180 PGIFPPSIAF LNPKCALWDC PRPAQGGNEG LVYCSSFHEE LALSEGAPGM CPVLRPGGID 240 LKDGPLFAAL TARVNGRAVG IPELHGAATS KTPWNATDLF DMAILHGEVL REWLFFDKPR 300 RAFESGTRKQ RSLPDYGGRG WHESRKQVMK EFGGLKRSYY MDPQPEGLFE WHLFEYELSS 360 RTDCALYRLE LKQVDASKKT GKAKAQTDPS IASLQHQIGR LSADLSQVEG QNMLPSLADS 420 RDSSRGRTKL TQKKTITKSA GSGQLVNTAL KGCWTLESHG R* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024378751.1 | 0.0 | transcription factor VOZ1-like isoform X2 | ||||
Swissprot | Q9SGQ0 | 1e-140 | VOZ1_ARATH; Transcription factor VOZ1 | ||||
TrEMBL | A0A2K1KF99 | 0.0 | A0A2K1KF99_PHYPA; Uncharacterized protein | ||||
STRING | PP1S113_68V6.1 | 0.0 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28520.2 | 1e-132 | vascular plant one zinc finger protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0033s0162.1.p |
Publications ? help Back to Top | |||
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