PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0033s0129.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

Dof

Protein Properties

Length: 311aa MW: 33979.2 Da PI: 8.669

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0033s0129.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	117.4	5.6e-37	55	111	5	61
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++cprC+s+ntkfCyynnys++qPryfC++C+ryWt+GG+lrnvPvGgg+rk+ ++ Sphfalx0033s0129.1.p 55 TIPCPRCQSMNTKFCYYNNYSVNQPRYFCRNCQRYWTEGGTLRNVPVGGGSRKKVRT 111 679**************************************************9765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-23	56	107	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.416	56	110	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.9E-32	56	109	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	58	94	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence Send to blast
MAIMHLRMNH CREDLDPDVI HQGSGDSASP GDQHSPGSAT RGSGGCMRER PVRVTIPCPR 60 CQSMNTKFCY YNNYSVNQPR YFCRNCQRYW TEGGTLRNVP VGGGSRKKVR TRQRSDWQLQ 120 SHDSPAALLG AGLVNMTLQP NFLQIPNTIQ MASTQQRLSM FSQMTGDKLG SFSNRFLLQS 180 GLNEIPPNTM TPHLPTFLQL SSSLEPVQIG NSAGGLSKNP AAAATTGLMS LQDNHMHSTL 240 HSAMYELQST SMPTNSSMLQ LGGGNIHAGF SNETAGGYNH YTPAHQKLES SHIEFLSSVM 300 QKPAGYWGVD *

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	2e-31	TARGET OF MONOPTEROS 6

Link Out ? help Back to Top
Phytozome	Sphfalx0033s0129.1.p