PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0033s0128.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

Dof

Protein Properties

Length: 330aa MW: 35691.8 Da PI: 8.046

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0033s0128.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	119	1.8e-37	58	116	4	62
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 k ++cprC+s+ntkfCyynnys++qPr+fC++C+ryWt GG+lrnvPvGgg+rk+ ++s Sphfalx0033s0128.1.p 58 KVIPCPRCQSMNTKFCYYNNYSVNQPRHFCRNCQRYWTVGGTLRNVPVGGGSRKKVRTS 116 6789**************************************************98765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-24	54	111	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	3.2E-32	59	113	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.407	60	114	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	62	98	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence Send to blast
MVINMHLTMN HCEGELDPDL IHQLSGDSGT SAGEHEESPS AAASRGSGGC MPRERPVKVI 60 PCPRCQSMNT KFCYYNNYSV NQPRHFCRNC QRYWTVGGTL RNVPVGGGSR KKVRTSRGQR 120 FNDGLQSHHQ DTARGSSCLQ TTGSALLNMT LQPNELFPSA IQMAAATQQQ LSMLSQAAAM 180 GAVGRLGSYS ANQLLQSAAG LIESPSINTI STTQLPTNNF FQHFPNMQQE RGQMNAYSTT 240 GTGLTSKTSA PASLMNYQDH QLGASTPAAH SVMYDLQSTH PAPNSTLQMQ LGASHDLQTT 300 GFNNHPNLEA NQIEFLSSLM QHKPGYWGA*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29160.1	6e-32	Dof family protein

Link Out ? help Back to Top
Phytozome	Sphfalx0033s0128.1.p