PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0032s0152.2.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family bHLH
Protein Properties Length: 780aa    MW: 82457.7 Da    PI: 6.6603
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0032s0152.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-08575622455
                           HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                   HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                           +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Sphfalx0032s0152.2.p 575 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 622
                           8*************************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474598.51E-17569640IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.51E-11569626No hitNo description
Gene3DG3DSA:4.10.280.101.1E-16571638IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.663571621IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-5575622IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.9E-10577627IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 780 aa     Download sequence    Send to blast
MAPPSEKSTM SCQERPSASA GHVHSSVHSC SGTPESSSLH KHSSSYPGVY MMPAALSTSL  60
SDKSMVGEES HHGNYSSSSV YEATAASESA AWQRSDNNSF ATLSKSLTAL GMSGHMTSTS  120
PRAFPSSQSN REDSSNRLGA DCCEELQDCS AGIGDHDWTQ FMNTGGASAF FSNSRPQDVL  180
MMLPSTNSIA QCSPPLVGRS HGAGNGTCSS IDGAGPAMSP RGHPAGSGHN NIANLTPTTG  240
NTWSTLNASS CQSLIMDPST GGIALQQVRL ATSQPASAEF GSDLEFPSRF SSLTGENICS  300
QRCSHSLHAL ADGRLSACGP KLACHAPSRQ HCESHDGRLS STVSASLAAL RIPSTHAAGL  360
IAGAASKHPG ECTFEGTQGK KAMVRERPWE SSAIQLNPVA EANLDDDGEP GSGLLQVESV  420
NGATDITTTA PIMTTEYDDG SAGQGLASCA EQAGENNNYR ASQATRGGLT TGLGKRKFAT  480
SQEKDNNLSG GNLASTSGRD AKLTERTGEP TAKRFKCGEG DNGNNLKAEH STSDHSGESS  540
PLESTRDDGP PKPPERHPKQ DYIHVRARRG QATDSHSLAE RVRREKISER MKFLQDLVPG  600
CNKVTGKAVM LDEIINYVQS LQHQVEFLSM KLAAVNPRLD FHLDSIFHKM LQSCASPPTT  660
LLGSDHGVHH EHPLQGEYQV PFQLAGPCGA DFRAGRAAAS EAYLRQTQSD PLCSRLAATV  720
SHGEPLSQTS SALDGELQSV VQMGFKADWS PSHGAIKYHH KHDQSFTTPW RSATSHSSY*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00660PBMTransfer from Pp3c6_9520Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.12e-51bHLH family protein