PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0030s0184.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family Dof
Protein Properties Length: 363aa    MW: 39195.7 Da    PI: 7.1331
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0030s0184.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.92.5e-393898262
                zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                          +++ ++cprC+s ntkfCyynnysl+qPr+fCk+CrryWt+GG+lrnvPvGgg+rknk+++
  Sphfalx0030s0184.1.p 38 PDQVMACPRCQSLNTKFCYYNNYSLTQPRHFCKNCRRYWTAGGTLRNVPVGGGCRKNKRAK 98
                          67899*****************************************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-263696IPR003851Zinc finger, Dof-type
PfamPF027011.3E-333996IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.3014296IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104480IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0048364Biological Processroot development
GO:0005634Cellular Componentnucleus
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MAMEPSSSGN EEQQQQQEKK ASQLFAQRAL QERRLKPPDQ VMACPRCQSL NTKFCYYNNY  60
SLTQPRHFCK NCRRYWTAGG TLRNVPVGGG CRKNKRAKHR NSADGQSSSG TAGNTESDLF  120
GAADQQQHTR LGSSSASFFN SEEGKVFANS QEATWSQSQG ASHSGEAGLA FAHSSQGPSI  180
GQHSQPFESG IMSLGLFNSV RPDAGLSMHT SQQVPGGDLS VFFDNSTYSR AGALAALSEG  240
HGSYNQTNGE EEASSYGRGE IWRNLQQPKQ EGLWSQDQES MQGSLDLNRQ QAKSKFTAPS  300
LSPTHGLGEE SPQPAAVAWQ QSASQGGMPH YETVPDTGFW SNSGWPPVDM HALHGSGGPR  360
LL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024361202.12e-86dof zinc finger protein 3-like
RefseqXP_024361204.12e-86dof zinc finger protein 3-like
RefseqXP_024361205.12e-86dof zinc finger protein 3-like
RefseqXP_024361206.12e-86dof zinc finger protein 3-like
RefseqXP_024361207.12e-86dof zinc finger protein 3-like
TrEMBLA0A2K1IMF04e-85A0A2K1IMF0_PHYPA; Uncharacterized protein
STRINGPP1S12_364V6.16e-86(Physcomitrella patens)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.15e-36TARGET OF MONOPTEROS 6