PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0029s0118.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | Dof | ||||||||
Protein Properties | Length: 357aa MW: 38358.6 Da PI: 8.4042 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 118.2 | 3.1e-37 | 59 | 116 | 4 | 61 |
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 k ++cprC+s+ntkfCyynnys++qPr+fC++C+ryWt GG+lrnvPvGgg+rk+ ++ Sphfalx0029s0118.1.p 59 KVIPCPRCQSMNTKFCYYNNYSVTQPRHFCRNCQRYWTVGGTLRNVPVGGGSRKKVQR 116 6789**************************************************9765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 9.0E-24 | 55 | 112 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 3.1E-32 | 60 | 114 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.192 | 61 | 115 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 63 | 99 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 357 aa Download sequence Send to blast |
MVMMHLAMMN RYEELEQDLI LGQQVSGDSP ISAGDDQQSP GSTRGGGSGG CMRAERPVKV 60 IPCPRCQSMN TKFCYYNNYS VTQPRHFCRN CQRYWTVGGT LRNVPVGGGS RKKVQRTRQQ 120 RCNDSAAAAG QQLQLSSHDP RRGGGFNGSA AELLNMTLQS NLLHQLPNTM QMAAATQQAA 180 ELSNLLQQAT AGGRSLGSSY IDHNQFLQSG LMQEQQQQQL PPASNTATSQ LQPTFFQFSN 240 MDQRGHSNAY STTGSCVSKS ASAQGTGGLM NHQDQTAGAA AVSMLYDHLQ SNHAAAAALP 300 NSTLLQMGNN NHIHGSSGFS SNGLGYNHPQ STMQDVAGNH IEFLSSVMHK PAYWGA* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29160.1 | 6e-31 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0029s0118.1.p |