PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0023s0152.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family ERF
Protein Properties Length: 281aa    MW: 30923.3 Da    PI: 7.9088
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0023s0152.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.11.2e-1965115155
                   AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                           ++ykGVr +  +g+Wv+eIr+p   +kr r++lg+f tae+Aa+a++aa  +l+g
  Sphfalx0023s0152.1.p  65 PKYKGVRMRQ-WGKWVSEIREP---NKRSRIWLGSFPTAEMAARAYDAAVVCLRG 115
                           79*****998.**********9...336*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.6E-1265115IPR001471AP2/ERF domain
CDDcd000182.76E-3165132No hitNo description
SMARTSM003806.4E-3366136IPR001471AP2/ERF domain
SuperFamilySSF541713.01E-1966119IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.109.3E-2966132IPR001471AP2/ERF domain
PROSITE profilePS5103222.61666130IPR001471AP2/ERF domain
PRINTSPR003671.5E-96778IPR001471AP2/ERF domain
PRINTSPR003671.5E-989105IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MVEKNKDEVS GDSNSYTGRK EISKFLLGAH GTGAALNNQI RGTSAKSPRS PKQQRHHQRQ  60
LSTSPKYKGV RMRQWGKWVS EIREPNKRSR IWLGSFPTAE MAARAYDAAV VCLRGPKLVA  120
GCTSTTLNFP DSPPLYVPCQ SPKDVQTAAA AAAAASEPCT PLSITKPIAL SLSEQQNYID  180
QYTGLEKNNH PESSSDSAET APGTPPQNGS TDQELHTKRT NAGSERPLRV QNSLVVQLHG  240
LDHYSNMSTG NCWPTEQQED WPYDWDQENF LFPSLDMSSY *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-13661301472Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50260.12e-27cooperatively regulated by ethylene and jasmonate 1