PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0022s0081.9.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | bHLH | ||||||||
Protein Properties | Length: 749aa MW: 80614.3 Da PI: 5.9586 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.4 | 5.4e-08 | 501 | 546 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h +Er RR + ++++++L +++P+ K + ++L+ +++YI+ L Sphfalx0022s0081.9.p 501 QKHMLAERDRRFKFKEKIHTLCSIVPTT------KKDNLSVLTNTIDYIRRL 546 57999**********************9......777899**********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47459 | 6.94E-11 | 494 | 555 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 9.674 | 498 | 546 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.07E-7 | 501 | 551 | No hit | No description |
Pfam | PF00010 | 8.8E-6 | 501 | 546 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.6E-11 | 502 | 555 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.9E-7 | 504 | 552 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 749 aa Download sequence Send to blast |
MATSGAAAAS ELAGHGDNVE FNWEERFQAL VQNWSWIDYI VVWKLNPHTP RALVWHRGYF 60 NDRSSSFHPE YSRRIAPIFS SIYRSCVFRS SNSGYAARAV YEQAPLWWTS NQPRLPTDER 120 KDQFLQELGI KTIVCLPGLG TDGNMYCLEL ASTQLESSGM LQALLAFASG SREQQLLAAG 180 LDEEELAVAQ QQQENIQLES VSTPSSDAEA AGGVPTDMML NLWASMSDID DAQMQMSSFM 240 QRSTLDSLVM AHDIMQIGQP PAAAAATMFG TTTQYPAMPV SATPAFHNVL PYHQLPGQHQ 300 SASTPYQRME TPELSAASTT ALEAAPSSSM NRLQAAGLPL APADPSSHVR QGMLAQLAGD 360 TRMPPAGSAR AVDQQLGNPS ESTVRSRAAA VSLHSPFKSF EPISRHPKLR RLDDSRDTGN 420 IAGPSKPRQP MIELWIKDLC PRIQESDRMK RRLQLGATVA GSSMNPAGAA GGSFMQGDTH 480 VSADQQYYSP GWIEEQAQIA QKHMLAERDR RFKFKEKIHT LCSIVPTTKK DNLSVLTNTI 540 DYIRRLKEQI AGLEMAGSTS TAAASTHDPA VLQAPAVTSS AGPSSSTAAA ELAQAQQQLR 600 SEAAAAATTH PSSSSINNTT TVAVSWRQFE LAGTEAAGAH GAMRAGTNTG ISSNAAGQLV 660 IEVETPYNNP QSLIQVLSVV QDLGLDLDSL SSGNLNNGRM QISVRVLAPA GSSSSQQLIQ 720 LSSVVKEKLE TMLALDSRNT PSTTSEMQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28800.1 | 4e-07 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0022s0081.9.p |