PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0022s0081.7.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | bHLH | ||||||||
Protein Properties | Length: 750aa MW: 80742.5 Da PI: 6.0703 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.8 | 9.6e-09 | 501 | 547 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h +Er RR + ++++++L +++P+ kK + ++L+ +++YI+ L Sphfalx0022s0081.7.p 501 QKHMLAERDRRFKFKEKIHTLCSIVPTT-----KKKDNLSVLTNTIDYIRRL 547 57999**********************9.....78899************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 12.874 | 498 | 547 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 4.32E-12 | 501 | 559 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.7E-6 | 501 | 547 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 7.81E-8 | 501 | 552 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 2.5E-12 | 502 | 556 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.2E-7 | 504 | 553 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 750 aa Download sequence Send to blast |
MATSGAAAAS ELAGHGDNVE FNWEERFQAL VQNWSWIDYI VVWKLNPHTP RALVWHRGYF 60 NDRSSSFHPE YSRRIAPIFS SIYRSCVFRS SNSGYAARAV YEQAPLWWTS NQPRLPTDER 120 KDQFLQELGI KTIVCLPGLG TDGNMYCLEL ASTQLESSGM LQALLAFASG SREQQLLAAG 180 LDEEELAVAQ QQQENIQLES VSTPSSDAEA AGGVPTDMML NLWASMSDID DAQMQMSSFM 240 QRSTLDSLVM AHDIMQIGQP PAAAAATMFG TTTQYPAMPV SATPAFHNVL PYHQLPGQHQ 300 SASTPYQRME TPELSAASTT ALEAAPSSSM NRLQAAGLPL APADPSSHVR QGMLAQLAGD 360 TRMPPAGSAR AVDQQLGNPS ESTVRSRAAA VSLHSPFKSF EPISRHPKLR RLDDSRDTGN 420 IAGPSKPRQP MIELWIKDLC PRIQESDRMK RRLQLGATVA GSSMNPAGAA GGSFMQGDTH 480 VSADQQYYSP GWIEEQAQIA QKHMLAERDR RFKFKEKIHT LCSIVPTTKK KDNLSVLTNT 540 IDYIRRLKEQ IAGLEMAGST STAAASTHDP AVLQAPAVTS SAGPSSSTAA AELAQAQQQL 600 RSEAAAAATT HPSSSSINNT TTVAVSWRQF ELAGTEAAGA HGAMRAGTNT GISSNAAGQL 660 VIEVETPYNN PQSLIQVLSV VQDLGLDLDS LSSGNLNNGR MQISVRVLAP AGSSSSQQLI 720 QLSSVVKEKL ETMLALDSRN TPSTTSEMQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28800.1 | 2e-08 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0022s0081.7.p |