PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0022s0081.3.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

bHLH

Protein Properties

Length: 752aa MW: 80998.8 Da PI: 6.1757

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0022s0081.3.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.7	9.7e-09	503	549	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h +Er RR + ++++++L +++P+ kK + ++L+ +++YI+ L Sphfalx0022s0081.3.p 503 QKHMLAERDRRFKFKEKIHTLCSIVPTT-----KKKDNLSVLTNTIDYIRRL 549 57999********************9.....78899**********98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	12.874	500	549	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.7E-6	503	549	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	7.84E-8	503	554	No hit	No description
SuperFamily	SSF47459	4.32E-12	503	561	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	2.5E-12	504	558	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.2E-7	506	555	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 752 aa Download sequence Send to blast
MATSGAAAAS ELAGHGDNVE FNWEERFQAL VQNWSWIDYI VVWKLNPHTP RALVWHRGYF 60 NDRSSSFHPE YSRRIAPIFS SIYRSCVFRS SNSGYAARAV YEQAPLWWTS NQPRLPTDER 120 KDQFLQELGI KTIVCLPGLG TDGNMYCLEL ASTQLKQESS GMLQALLAFA SGSREQQLLA 180 AGLDEEELAV AQQQQENIQL ESVSTPSSDA EAAGGVPTDM MLNLWASMSD IDDAQMQMSS 240 FMQRSTLDSL VMAHDIMQIG QPPAAAAATM FGTTTQYPAM PVSATPAFHN VLPYHQLPGQ 300 HQSASTPYQR METPELSAAS TTALEAAPSS SMNRLQAAGL PLAPADPSSH VRQGMLAQLA 360 GDTRMPPAGS ARAVDQQLGN PSESTVRSRA AAVSLHSPFK SFEPISRHPK LRRLDDSRDT 420 GNIAGPSKPR QPMIELWIKD LCPRIQESDR MKRRLQLGAT VAGSSMNPAG AAGGSFMQGD 480 THVSADQQYY SPGWIEEQAQ IAQKHMLAER DRRFKFKEKI HTLCSIVPTT KKKDNLSVLT 540 NTIDYIRRLK EQIAGLEMAG STSTAAASTH DPAVLQAPAV TSSAGPSSST AAAELAQAQQ 600 QLRSEAAAAA TTHPSSSSIN NTTTVAVSWR QFELAGTEAA GAHGAMRAGT NTGISSNAAG 660 QLVIEVETPY NNPQSLIQVL SVVQDLGLDL DSLSSGNLNN GRMQISVRVL APAGSSSSQQ 720 LIQLSSVVKE KLETMLALDS RNTPSTTSEM Q*

Sequence ? help Back to Top

Protein Sequence Length: 752 aa Download sequence Send to blast

MATSGAAAAS ELAGHGDNVE FNWEERFQAL VQNWSWIDYI VVWKLNPHTP RALVWHRGYF  60
NDRSSSFHPE YSRRIAPIFS SIYRSCVFRS SNSGYAARAV YEQAPLWWTS NQPRLPTDER  120
KDQFLQELGI KTIVCLPGLG TDGNMYCLEL ASTQLKQESS GMLQALLAFA SGSREQQLLA  180
AGLDEEELAV AQQQQENIQL ESVSTPSSDA EAAGGVPTDM MLNLWASMSD IDDAQMQMSS  240
FMQRSTLDSL VMAHDIMQIG QPPAAAAATM FGTTTQYPAM PVSATPAFHN VLPYHQLPGQ  300
HQSASTPYQR METPELSAAS TTALEAAPSS SMNRLQAAGL PLAPADPSSH VRQGMLAQLA  360
GDTRMPPAGS ARAVDQQLGN PSESTVRSRA AAVSLHSPFK SFEPISRHPK LRRLDDSRDT  420
GNIAGPSKPR QPMIELWIKD LCPRIQESDR MKRRLQLGAT VAGSSMNPAG AAGGSFMQGD  480
THVSADQQYY SPGWIEEQAQ IAQKHMLAER DRRFKFKEKI HTLCSIVPTT KKKDNLSVLT  540
NTIDYIRRLK EQIAGLEMAG STSTAAASTH DPAVLQAPAV TSSAGPSSST AAAELAQAQQ  600
QLRSEAAAAA TTHPSSSSIN NTTTVAVSWR QFELAGTEAA GAHGAMRAGT NTGISSNAAG  660
QLVIEVETPY NNPQSLIQVL SVVQDLGLDL DSLSSGNLNN GRMQISVRVL APAGSSSSQQ  720
LIQLSSVVKE KLETMLALDS RNTPSTTSEM Q*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28800.1	2e-08	bHLH family protein

Link Out ? help Back to Top
Phytozome	Sphfalx0022s0081.3.p