PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0022s0081.2.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

bHLH

Protein Properties

Length: 760aa MW: 81662.5 Da PI: 6.0428

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0022s0081.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.7	9.8e-09	511	557	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h +Er RR + ++++++L +++P+ kK + ++L+ +++YI+ L Sphfalx0022s0081.2.p 511 QKHMLAERDRRFKFKEKIHTLCSIVPTT-----KKKDNLSVLTNTIDYIRRL 557 57999********************9.....78899**********98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	12.874	508	557	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.7E-6	511	557	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	4.32E-12	511	569	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	7.95E-8	511	562	No hit	No description
Gene3D	G3DSA:4.10.280.10	2.5E-12	512	566	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	1.2E-7	514	563	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 760 aa Download sequence Send to blast
MATSGAAAAS ELAGHGDNVE FNWEERFQAL VQNWSWIDYI VVWKLNPHTP ALVWHRGYFN 60 DRSSSFHPEY SRRIAPIFSS IYRSCVFRSS NSGYAARAVY EQAPLWWTSN QPRLPTDERK 120 DQFLQELGIK TIVCLPGLGT DGNMYCLELA STQLKQESSG MLQALLAFAS GSREQQLLAA 180 GTIPHDGAAG LDEEELAVAQ QQQENIQLES VSTPSSDAEA AGGVPTDMML NLWASMSDID 240 DAQMQMSSFM QRSTLDSLVM AHDIMQIGQP PAAAAATMFG TTTQYPAMPV SATPAFHNVL 300 PYHQLPGQHQ SASTPYQRME TPELSAASTT ALEAAPSSSM NRLQAAGLPL APADPSSHVR 360 QGMLAQLAGD TRMPPAGSAR AVDQQLGNPS ESTVRSRAAA VSLHSPFKSF EPISRHPKLR 420 RLDDSRDTGN IAGPSKPRQP MIELWIKDLC PRIQESDRMK RRLQLGATVA GSSMNPAGAA 480 GGSFMQGDTH VSADQQYYSP GWIEEQAQIA QKHMLAERDR RFKFKEKIHT LCSIVPTTKK 540 KDNLSVLTNT IDYIRRLKEQ IAGLEMAGST STAAASTHDP AVLQAPAVTS SAGPSSSTAA 600 AELAQAQQQL RSEAAAAATT HPSSSSINNT TTVAVSWRQF ELAGTEAAGA HGAMRAGTNT 660 GISSNAAGQL VIEVETPYNN PQSLIQVLSV VQDLGLDLDS LSSGNLNNGR MQISVRVLAP 720 AGSSSSQQLI QLSSVVKEKL ETMLALDSRN TPSTTSEMQ*

Sequence ? help Back to Top

Protein Sequence Length: 760 aa Download sequence Send to blast

MATSGAAAAS ELAGHGDNVE FNWEERFQAL VQNWSWIDYI VVWKLNPHTP ALVWHRGYFN  60
DRSSSFHPEY SRRIAPIFSS IYRSCVFRSS NSGYAARAVY EQAPLWWTSN QPRLPTDERK  120
DQFLQELGIK TIVCLPGLGT DGNMYCLELA STQLKQESSG MLQALLAFAS GSREQQLLAA  180
GTIPHDGAAG LDEEELAVAQ QQQENIQLES VSTPSSDAEA AGGVPTDMML NLWASMSDID  240
DAQMQMSSFM QRSTLDSLVM AHDIMQIGQP PAAAAATMFG TTTQYPAMPV SATPAFHNVL  300
PYHQLPGQHQ SASTPYQRME TPELSAASTT ALEAAPSSSM NRLQAAGLPL APADPSSHVR  360
QGMLAQLAGD TRMPPAGSAR AVDQQLGNPS ESTVRSRAAA VSLHSPFKSF EPISRHPKLR  420
RLDDSRDTGN IAGPSKPRQP MIELWIKDLC PRIQESDRMK RRLQLGATVA GSSMNPAGAA  480
GGSFMQGDTH VSADQQYYSP GWIEEQAQIA QKHMLAERDR RFKFKEKIHT LCSIVPTTKK  540
KDNLSVLTNT IDYIRRLKEQ IAGLEMAGST STAAASTHDP AVLQAPAVTS SAGPSSSTAA  600
AELAQAQQQL RSEAAAAATT HPSSSSINNT TTVAVSWRQF ELAGTEAAGA HGAMRAGTNT  660
GISSNAAGQL VIEVETPYNN PQSLIQVLSV VQDLGLDLDS LSSGNLNNGR MQISVRVLAP  720
AGSSSSQQLI QLSSVVKEKL ETMLALDSRN TPSTTSEMQ*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28800.1	2e-08	bHLH family protein

Link Out ? help Back to Top
Phytozome	Sphfalx0022s0081.2.p