PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0022s0081.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | bHLH | ||||||||
Protein Properties | Length: 761aa MW: 81818.7 Da PI: 6.1447 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.7 | 9.8e-09 | 512 | 558 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h +Er RR + ++++++L +++P+ kK + ++L+ +++YI+ L Sphfalx0022s0081.1.p 512 QKHMLAERDRRFKFKEKIHTLCSIVPTT-----KKKDNLSVLTNTIDYIRRL 558 57999**********************9.....78899************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 12.874 | 509 | 558 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 4.32E-12 | 512 | 570 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 7.97E-8 | 512 | 563 | No hit | No description |
Pfam | PF00010 | 1.7E-6 | 512 | 558 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.5E-12 | 513 | 567 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 1.2E-7 | 515 | 564 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 761 aa Download sequence Send to blast |
MATSGAAAAS ELAGHGDNVE FNWEERFQAL VQNWSWIDYI VVWKLNPHTP RALVWHRGYF 60 NDRSSSFHPE YSRRIAPIFS SIYRSCVFRS SNSGYAARAV YEQAPLWWTS NQPRLPTDER 120 KDQFLQELGI KTIVCLPGLG TDGNMYCLEL ASTQLKQESS GMLQALLAFA SGSREQQLLA 180 AGTIPHDGAA GLDEEELAVA QQQQENIQLE SVSTPSSDAE AAGGVPTDMM LNLWASMSDI 240 DDAQMQMSSF MQRSTLDSLV MAHDIMQIGQ PPAAAAATMF GTTTQYPAMP VSATPAFHNV 300 LPYHQLPGQH QSASTPYQRM ETPELSAAST TALEAAPSSS MNRLQAAGLP LAPADPSSHV 360 RQGMLAQLAG DTRMPPAGSA RAVDQQLGNP SESTVRSRAA AVSLHSPFKS FEPISRHPKL 420 RRLDDSRDTG NIAGPSKPRQ PMIELWIKDL CPRIQESDRM KRRLQLGATV AGSSMNPAGA 480 AGGSFMQGDT HVSADQQYYS PGWIEEQAQI AQKHMLAERD RRFKFKEKIH TLCSIVPTTK 540 KKDNLSVLTN TIDYIRRLKE QIAGLEMAGS TSTAAASTHD PAVLQAPAVT SSAGPSSSTA 600 AAELAQAQQQ LRSEAAAAAT THPSSSSINN TTTVAVSWRQ FELAGTEAAG AHGAMRAGTN 660 TGISSNAAGQ LVIEVETPYN NPQSLIQVLS VVQDLGLDLD SLSSGNLNNG RMQISVRVLA 720 PAGSSSSQQL IQLSSVVKEK LETMLALDSR NTPSTTSEMQ * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28800.1 | 2e-08 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0022s0081.1.p |