PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0018s0169.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | bHLH | ||||||||
Protein Properties | Length: 647aa MW: 68748.7 Da PI: 6.8563 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.6 | 1.1e-08 | 449 | 496 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq Sphfalx0018s0169.1.p 449 SHSLAERVRREKISERMKFLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 496 8*************************9....556*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 4.81E-11 | 443 | 500 | No hit | No description |
SuperFamily | SSF47459 | 2.22E-16 | 443 | 512 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 5.7E-16 | 445 | 509 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.669 | 445 | 495 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 8.8E-6 | 449 | 496 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.0E-9 | 451 | 501 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 647 aa Download sequence Send to blast |
MQLWMEITMD DEGPSGNNVP SVSPSAGWQS SKLQAADMHF FAPETDSIDG YGTPNSAVMP 60 PLDSSYTSGA SPQRLGSGLL LTRGNCSWST CMDHTMNFRS MMGSLVGASA SSGVLAALQQ 120 AGAAAADLAT SHCLAQFSSD PGFAERAAKF SSFSSSNGNT YNSQTPYALG PDGVKPARGS 180 RSIIASDAGG DNVVDGKLSR SSSCSRLAKL APSSIITSAR RTSHGAGSSS VVQSKSPDAA 240 GRREMVESKS PVMQRDDMKM KKSLQTIGMS GREDMSPHAA AAMETFEAGT TEIGRRRGVN 300 DTTDDEAADH GFRHSSAAGS SQQACGDRDA CITGKRKHLV IQQTDELLYC KETAGGRNAA 360 AQAAATAAGG GDDTNVKRQR SSGENSAVRE VDAKLLRTVD RTLSESYSGE SSPLSMEKQE 420 SPCKPSEPPP PPKHDYIHVR ARRGQATDSH SLAERVRREK ISERMKFLQD LVPGCSKVTG 480 KAVMLDEIIN YVQSLQRQIE FLSMKLAAVN PGMDCTVDDF LCKKMQGSTA PMIMGPNTTT 540 MSYGHHHPQS QQQQVHNLQT VGHSGLDFKP LESSAEASLG RTMSAPVIGP VSSLDAFGDN 600 LSQLSSGWEG ELQSVVNMGF LQGRLSTWLP QESHCQMQAG KMKVEL* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G07340.1 | 5e-50 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0018s0169.1.p |