PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0017s0114.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

C2H2

Protein Properties

Length: 769aa MW: 83251 Da PI: 9.034

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0017s0114.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF06136	1.9E-35	64	248	IPR010369	Protein of unknown function DUF966

Sequence ? help Back to Top
Protein Sequence Length: 769 aa Download sequence Send to blast
MSNVLQLADD IPSLTDLHCL CNTGSKNKKQ GSSCCCCRSL QSGKMSKQQQ MTMKDAGGKA 60 YRKVEVVYHL SQPASSSSLS RLLDHHPHMI QVQFPSDRSG PCLRDVKNRL TSLRGQGMPD 120 AFSWSNKRNY RGTFIWCDLC EDDFILPLRG SGEYILKASE LFEGSGSSQA LNIDQHQGNH 180 LASKSISLIE SQVADVRTKP SKQSVDLDAL NSSDVSMAIS KSLLLINHDA NKLTSGSSCA 240 NVDQQVMGYT LSNFETTTPA EVWTLEDSSN LSSSEAFLPH VEATKSNKVP KKMVRPQSTE 300 VSTASDSIAY YPLSSEGNAL DPQKVLDVAI QTTGLPPGHP RTRAEINKGT TTGGVFLPHT 360 AAMTRDSPLK RRACKKEEAW RSSPAYSGQN TTQSASVSSR NENSGMHVSG LLHGVIPRFG 420 LPEGDYTIGL ALKAPASLEG YRARLCRNID VVESHTQLDS VKKTRSEGKS NSEKQDKETK 480 LISVFLGRHF QTAASSKKMV KESKLDGGGP SGKKSGLYLR LIGDEVFDLG CKKVGVIHQA 540 VSHSKSSKSV GEAATGRLKS VSSSTTPPVS LASVAASSIL FNPPEYVMDM SATDNPQRQA 600 QVTPEDIKTA MFSDYNLSSN DSSTPELKKT KAASSASVNP LPPKMHNGSK QGMKSSSTLE 660 SRETLSTVSG QSITNEMQLW PKDQARPRDF RSMDERPLTP GLTSIDWETM LQAAVSQSQP 720 PPDLVLHECL QCGRTFKLDS LTVHMRGCHA PTKAATKPTV TLLRRVPA*

Sequence ? help Back to Top

Protein Sequence Length: 769 aa Download sequence Send to blast

MSNVLQLADD IPSLTDLHCL CNTGSKNKKQ GSSCCCCRSL QSGKMSKQQQ MTMKDAGGKA  60
YRKVEVVYHL SQPASSSSLS RLLDHHPHMI QVQFPSDRSG PCLRDVKNRL TSLRGQGMPD  120
AFSWSNKRNY RGTFIWCDLC EDDFILPLRG SGEYILKASE LFEGSGSSQA LNIDQHQGNH  180
LASKSISLIE SQVADVRTKP SKQSVDLDAL NSSDVSMAIS KSLLLINHDA NKLTSGSSCA  240
NVDQQVMGYT LSNFETTTPA EVWTLEDSSN LSSSEAFLPH VEATKSNKVP KKMVRPQSTE  300
VSTASDSIAY YPLSSEGNAL DPQKVLDVAI QTTGLPPGHP RTRAEINKGT TTGGVFLPHT  360
AAMTRDSPLK RRACKKEEAW RSSPAYSGQN TTQSASVSSR NENSGMHVSG LLHGVIPRFG  420
LPEGDYTIGL ALKAPASLEG YRARLCRNID VVESHTQLDS VKKTRSEGKS NSEKQDKETK  480
LISVFLGRHF QTAASSKKMV KESKLDGGGP SGKKSGLYLR LIGDEVFDLG CKKVGVIHQA  540
VSHSKSSKSV GEAATGRLKS VSSSTTPPVS LASVAASSIL FNPPEYVMDM SATDNPQRQA  600
QVTPEDIKTA MFSDYNLSSN DSSTPELKKT KAASSASVNP LPPKMHNGSK QGMKSSSTLE  660
SRETLSTVSG QSITNEMQLW PKDQARPRDF RSMDERPLTP GLTSIDWETM LQAAVSQSQP  720
PPDLVLHECL QCGRTFKLDS LTVHMRGCHA PTKAATKPTV TLLRRVPA*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Link Out ? help Back to Top
Phytozome	Sphfalx0017s0114.1.p