PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0016s0248.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

Trihelix

Protein Properties

Length: 426aa MW: 48245.1 Da PI: 7.6141

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0016s0248.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	32.3	2.5e-10	44	126	2	78
trihelix 2 WtkqevlaLiearremeerlrrgk........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessst 78 W++ ev L++a+r+++ +l + ++ +W e + + + g+er++k+ + kw+nl + +k+i e++k+ +++s Sphfalx0016s0248.1.p 44 WQDTEVDGLVAAYRQIHVKLAVAGkrgktvfgSAYEKWNETQQLLNRMGIERQAKEIERKWSNLYTGFKQILEWNKRL--GNRSY 126 ************99888885322445777799****************************************96..33334 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	1.8E-7	42	129	No hit	No description
Gene3D	G3DSA:3.40.50.620	7.9E-68	207	422	IPR014729	Rossmann-like alpha/beta/alpha sandwich fold
SuperFamily	SSF52374	2.22E-45	210	422	No hit	No description
Pfam	PF01467	1.8E-22	214	396	IPR004821	Cytidyltransferase-like domain
TIGRFAMs	TIGR00482	4.7E-40	215	422	IPR005248	Probable nicotinate-nucleotide adenylyltransferase

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009435	Biological Process	NAD biosynthetic process
GO:0016779	Molecular Function	nucleotidyltransferase activity

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence Send to blast
MEVEGVEVAA AAQVEVGKRG WEGRASADWA DEAKSSKKRR ADNWQDTEVD GLVAAYRQIH 60 VKLAVAGKRG KTVFGSAYEK WNETQQLLNR MGIERQAKEI ERKWSNLYTG FKQILEWNKR 120 LGNRSYWEVD EQTKKEKTKA KELPSTFRME LFDAMIEFLG DDSDPKLRPR DSPSSALPAS 180 PLYGGVDVPL PMDKLASHVP PFGTQERRPQ LVLVATGNFN PPTYLHLRLF EIARDWLTCE 240 GFDVLGGYMS PFHDAHNKKG LAPAEHRIKL CQLATSDSQF VMVDPWEAKQ LMSQKIVQVL 300 SRIDTAINGK IPGEERVKVM LLCGSDVLKW LSTPGAWVPQ QTESICEDYG IICVTRDGSN 360 TRKLIFENDF LYEHRRNILL VDEWIQNDIS STKIRHMVAQ GLSVKYLTPD VVVKYIGLNH 420 LYGHA*

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence Send to blast

MEVEGVEVAA AAQVEVGKRG WEGRASADWA DEAKSSKKRR ADNWQDTEVD GLVAAYRQIH  60
VKLAVAGKRG KTVFGSAYEK WNETQQLLNR MGIERQAKEI ERKWSNLYTG FKQILEWNKR  120
LGNRSYWEVD EQTKKEKTKA KELPSTFRME LFDAMIEFLG DDSDPKLRPR DSPSSALPAS  180
PLYGGVDVPL PMDKLASHVP PFGTQERRPQ LVLVATGNFN PPTYLHLRLF EIARDWLTCE  240
GFDVLGGYMS PFHDAHNKKG LAPAEHRIKL CQLATSDSQF VMVDPWEAKQ LMSQKIVQVL  300
SRIDTAINGK IPGEERVKVM LLCGSDVLKW LSTPGAWVPQ QTESICEDYG IICVTRDGSN  360
TRKLIFENDF LYEHRRNILL VDEWIQNDIS STKIRHMVAQ GLSVKYLTPD VVVKYIGLNH  420
LYGHA*

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1gzu_B	2e-55	208	423	17	266	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE
1gzu_C	2e-55	208	423	17	266	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE
1kqn_A	2e-55	208	423	6	255	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE
1kqn_B	2e-55	208	423	6	255	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE
1kqn_C	2e-55	208	423	6	255	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE
1kqn_D	2e-55	208	423	6	255	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE
1kqn_E	2e-55	208	423	6	255	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE
1kqn_F	2e-55	208	423	6	255	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE
1kqo_A	2e-55	208	423	6	255	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE
1kqo_B	2e-55	208	423	6	255	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE
1kqo_C	2e-55	208	423	6	255	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE
1kqo_D	2e-55	208	423	6	255	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE
1kqo_E	2e-55	208	423	6	255	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE
1kqo_F	2e-55	208	423	6	255	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE
1kr2_A	2e-55	208	423	6	255	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE
1kr2_B	2e-55	208	423	6	255	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE
1kr2_C	2e-55	208	423	6	255	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE
1kr2_D	2e-55	208	423	6	255	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE
1kr2_E	2e-55	208	423	6	255	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE
1kr2_F	2e-55	208	423	6	255	NICOTINAMIDE MONONUCLEOTIDE ADENYLYL TRANSFERASE
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Functional Description ? help Back to Top
Source	Description
UniProt	Catalyzes the formation of NAD(+) from nicotinamide mononucleotide (NMN) and ATP. Can also use the deamidated form; nicotinic acid mononucleotide (NaMN) as substrate. {ECO:0000250\|UniProtKB:Q9HAN9}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024387340.1	1e-155	uncharacterized protein LOC112287926 isoform X1
Refseq	XP_024387342.1	1e-155	uncharacterized protein LOC112287926 isoform X1
Swissprot	F4K687	4e-81	NMNAT_ARATH; Nicotinamide/nicotinic acid mononucleotide adenylyltransferase
TrEMBL	A0A2R6XJK2	1e-155	A0A2R6XJK2_MARPO; Uncharacterized protein
STRING	PP1S330_22V6.1	1e-155	(Physcomitrella patens)

Link Out ? help Back to Top
Phytozome	Sphfalx0016s0248.1.p

Publications ? help Back to Top
Hashida SN,Takahashi H,Kawai-Yamada M,Uchimiya H Arabidopsis thaliana nicotinate/nicotinamide mononucleotide adenyltransferase (AtNMNAT) is required for pollen tube growth. Plant J., 2007. 49(4): p. 694-703 [PMID:17270012]