PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0011s0144.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | WRKY | ||||||||
Protein Properties | Length: 877aa MW: 91985.9 Da PI: 9.5616 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.6 | 3.8e-31 | 434 | 492 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDg++WrKYGqK vk+s++pr+YYrCt+++Cpv+k+vers ed +v++tYeg+H+h+ Sphfalx0011s0144.1.p 434 MDDGFKWRKYGQKAVKNSPHPRNYYRCTTPNCPVRKRVERSCEDSGLVITTYEGTHTHQ 492 59********************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.7E-33 | 419 | 494 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.19E-29 | 427 | 494 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.997 | 429 | 494 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.5E-37 | 434 | 493 | IPR003657 | WRKY domain |
Pfam | PF03106 | 8.0E-25 | 435 | 492 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 877 aa Download sequence Send to blast |
MAGQPPNEEG EDSGMHSLQE SYLDQILRSL KSEQEEISAA PSSAASTHDA SAAAGSSSYV 60 TRMPPGSSSN IQAAPPDQLG GSGGGSAGSA LSPWPFISSS ASRHPATGLP RSLQTKQEAG 120 KQESEQLYRG VVDTPGSSSS FHRDLQFMSE FPAWFIQDEG LEQQGAGVVV GGSQIPGAGP 180 SSYSSRFSDR PEDVEFLAGR PHESFDAQLG NFRMSSSSAG LDVAAQAAAG RRSRSSTAMQ 240 PTSSESLYGA GPQQGRMWHP ASLESITSMQ QTPISAAAPR PGPRGPSDAV EPPAAAGVAA 300 RGRSTTMNPE TPTSSLSLGS SSEGDDDAER RSSSRGRHQT AASPVAEEGA SSAKRKTPER 360 SLEEAGGEEQ STKSGSESKR LQQHSLKRDV QLADVNLLGS ARVVSRNRPR KKGGAKRVRE 420 PRYAIKTRTD VDIMDDGFKW RKYGQKAVKN SPHPRNYYRC TTPNCPVRKR VERSCEDSGL 480 VITTYEGTHT HQTPGFHRSS PSHGFFGERP VLGLGGGLFA PPHGSSHMAP GLAGLNFPAP 540 SNFASLQHSV AARGPGTSSL VGLGAAAPGQ QLVDQSAAPS LAGASTSSIS LQEGLLRAHR 600 SLLGLQESFV VKQEPMQFTA GSHQDFLSRS SSSGLPQLIP RQMPQGQGQA AAGIRSAPDS 660 SSSAAMLQFG RQRQLQQAGG SGSASGSSAQ AGPFTALIQQ QTQRQMITNP GPSGGQQLQG 720 ESGSSLLSRA RAGSPGQETI STRGDRNPSS SSNTLISLQA AAAAGSHHHQ QQQQQQQQQQ 780 QLDFVRSVTL NMQRSQQDRR QQLLEADRQQ QQQQAAARLN ILRSSSSGGA GGQQISEESL 840 QKSSQEISRG ATDQGLLEDI VRPGSGQGPP PAPPGM* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 1e-25 | 422 | 494 | 2 | 74 | WRKY transcription factor 1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69310.2 | 6e-36 | WRKY DNA-binding protein 57 |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0011s0144.1.p |