PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0011s0091.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family WRKY
Protein Properties Length: 941aa    MW: 100173 Da    PI: 7.0542
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0011s0091.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.35.1e-31465523159
                           ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                  WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                           +dDg++WrKYGqK vk+s++pr+YYrCt+++Cpv+k+vers ed ++v++tYeg+H h+
  Sphfalx0011s0091.1.p 465 MDDGFKWRKYGQKAVKNSPHPRNYYRCTTPNCPVRKRVERSCEDSRLVITTYEGTHAHH 523
                           59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.2E-33450525IPR003657WRKY domain
SuperFamilySSF1182903.92E-28458525IPR003657WRKY domain
PROSITE profilePS5081131.548460525IPR003657WRKY domain
SMARTSM007743.0E-36465524IPR003657WRKY domain
PfamPF031062.4E-24466523IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 941 aa     Download sequence    Send to blast
MAGRPQNIDQ AEEGEAGSAG SHHSGESYLD QILRSLQSEQ ESPTSSDTYN TAAPSAMMAP  60
ATAGSMMSSY AQRAPPGSSS FDIAAAVTAP EQGGGSGSGG STKPWPAFIA PSSSHPARVV  120
MSTLRKQSEF VGQESEHMNY TRVDTQAAAS SNFPSGDPLT SQFPWLIEDQ PAEQQRGAGG  180
NAGQLLHGAP TGLMSYMSSS RFSNPPEDDR LAGSQEHDQQ FAAHQFGFGM SRPASRTPHE  240
LDVAPIDQGA ARGRTTSSTP AAMIMSEPLY ETPPPMLQQV QQLPHQQQGR MSLPAYSFQS  300
AKILMPPQHM SSYIPLVKDA EADDPRGPMG STPEIEPPAG AASAARTMSV INQDTTTPNS  360
SLSSGISLST EGDDLDAERS TRSASSRGQL HQTSTASPAE EGASSTKRKT PEDEVGEETT  420
KSEAGLPAEL KKQPSLNRPR KKSAGMKRVR EPRYSIKTRT DVDIMDDGFK WRKYGQKAVK  480
NSPHPRNYYR CTTPNCPVRK RVERSCEDSR LVITTYEGTH AHHTPGFNRG SPSLLHAYFG  540
EAARASAALM GHGQHQHQHQ LFGLPAATQM MISGSTLQQL QGGLTSSSAS HGPGSFLQPS  600
FHLNNAGLAL GLRAAAAAAA AAGQDTFVGA VKQEPFPFAA SSSRTHDPQD QFLSRLASSA  660
AGLPRIIPIQ MQNAAPDAVD VMNMRSAATP AIVDSSASSS AASYMNYQQQ LIHPRQMLAA  720
AATAAPVSGS ASTVEAGSPQ AGLPANTGLG FNTNLLLQQQ QQALQQQMVT NPRRVQSGCQ  780
ELQPGESSST FDQGMGARSN PASVSNTSIV DDLAAQQHQL HPEFFHGSTK LLMSMPRTQQ  840
DIRQLLELAA YRQQQQQQLT ARLNTIYRDS SASAASGAAA AARIITEQDL HKSSSEEYSR  900
RSGRRATLID QGLLEDMVRP RSWQGPPPPP PPRPPAASSM *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A8e-26453525274WRKY transcription factor 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.23e-35WRKY DNA-binding protein 57