PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0010s0233.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

G2-like

Protein Properties

Length: 531aa MW: 57658.6 Da PI: 4.8448

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0010s0233.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.9	8.4e-32	318	373	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k r++Wt eLH+rFv a++qLGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ Sphfalx0010s0233.1.p 318 KSRRCWTAELHRRFVGALQQLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 373 68****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.2E-28	315	376	IPR009057	Homeodomain-like
PROSITE profile	PS51294	13.158	315	375	IPR017930	Myb domain
SuperFamily	SSF46689	1.94E-17	316	376	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.2E-26	318	373	IPR006447	Myb domain, plants
Pfam	PF00249	3.6E-6	320	371	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence Send to blast
MESPVDLTLG SAHTASSSYT NATNTVNGLE SSLSFVGDHL ERIRKIEEYL QALEDERRKI 60 EAFKRELPLC MQLLEETIES SKEQLAENGV LPTTQLPVGA AAVSSPTRLR GLEFMPLKAQ 120 AWERQQQKDE GDDHDQEGDG SECPGVVDIE KMTWMTEAQL WTQQLEPSSE LHCENDRMSM 180 EEDMGRHPNF DQSEQEQCSV TSSRFELFSS KQPPAGAFLP FVGEQQVVTA APPPSGSTTG 240 TTGSGADLSL SSLDHVSSPN GNGFGGAESE VGSIDVTRLR TPDRILDAQG CNLGIRPQSN 300 GVSEAGSTRV FGSQSQRKSR RCWTAELHRR FVGALQQLGG SQVATPKQIR ELMKVDGLTN 360 DEVKSHLQKY RLHTRRRSTS SQSVSLEAPQ MVGMWVPLEC AVAQAAAQPT SGVYDPSPPS 420 YCQPSHPQDY FTCNMSTGSS GGQLKQHPTT FEPQKSSLLS QSSPQGPLQL SSQLSGGAQE 480 LSNEDSGGGD VKSDSTSWKS CQLDVIEGKE SGRSIQHTVK QDNNGQQIKR *

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence Send to blast

MESPVDLTLG SAHTASSSYT NATNTVNGLE SSLSFVGDHL ERIRKIEEYL QALEDERRKI  60
EAFKRELPLC MQLLEETIES SKEQLAENGV LPTTQLPVGA AAVSSPTRLR GLEFMPLKAQ  120
AWERQQQKDE GDDHDQEGDG SECPGVVDIE KMTWMTEAQL WTQQLEPSSE LHCENDRMSM  180
EEDMGRHPNF DQSEQEQCSV TSSRFELFSS KQPPAGAFLP FVGEQQVVTA APPPSGSTTG  240
TTGSGADLSL SSLDHVSSPN GNGFGGAESE VGSIDVTRLR TPDRILDAQG CNLGIRPQSN  300
GVSEAGSTRV FGSQSQRKSR RCWTAELHRR FVGALQQLGG SQVATPKQIR ELMKVDGLTN  360
DEVKSHLQKY RLHTRRRSTS SQSVSLEAPQ MVGMWVPLEC AVAQAAAQPT SGVYDPSPPS  420
YCQPSHPQDY FTCNMSTGSS GGQLKQHPTT FEPQKSSLLS QSSPQGPLQL SSQLSGGAQE  480
LSNEDSGGGD VKSDSTSWKS CQLDVIEGKE SGRSIQHTVK QDNNGQQIKR *

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	2e-13	318	371	1	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-13	318	371	1	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-13	318	371	1	54	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-13	318	371	1	54	Protein PHOSPHATE STARVATION RESPONSE 1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	7e-35	G2-like family protein

Link Out ? help Back to Top
Phytozome	Sphfalx0010s0233.1.p