PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sphfalx0009s0188.1.p

Organism

Sphagnum fallax

Taxonomic ID

53036

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum

Family

Trihelix

Protein Properties

Length: 371aa MW: 41576.4 Da PI: 7.6744

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sphfalx0009s0188.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	49.7	1e-15	43	130	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85 +Wt++ + aL+++++e+++ l+rg+l+ +W+e + ++ + + +++ qCk+k+e+++k+y+++k+++++ ++ ++++f+ l Sphfalx0009s0188.1.p 43 EWTDSSITALLDIYEEKWNYLKRGNLRSRDWSELALQVsarcHGPKAVKTASQCKNKIESMKKKYRAEKQSRNST--GTAPRWKFFTCL 129 5*****************************96655544116666788********************94..66678**987 PP trihelix 86 e 86 + Sphfalx0009s0188.1.p 130 D 130 6 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	2.4E-17	42	131	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence Send to blast
MMMASPEEMV QCSDAEGGAP PMGRESKKAK RDLEDMTKEK SQEWTDSSIT ALLDIYEEKW 60 NYLKRGNLRS RDWSELALQV SARCHGPKAV KTASQCKNKI ESMKKKYRAE KQSRNSTGTA 120 PRWKFFTCLD TMLSGAPPPL KVLSVPPAPP PPDLGCQPAV VDIDSREGLA QVESGDSGAQ 180 ECPTHVLVAP CLTNMAQSNA VHNTCCLVRA RKSTVHASVA IVVSRQTSVQ PLEETVTIST 240 DQEFQEFLEN EDSFLFDETN KKVVHFMSLR NNRHYHLEQK PGKVITLRSP SRLPPTFLRV 300 KLRNTKEFDS FLRSMGFVGL LPFPSNKDMD SLVLKYSELV DGSICVGYKP GRLPFMDDFQ 360 DDEKDRIQQQ *

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence Send to blast

MMMASPEEMV QCSDAEGGAP PMGRESKKAK RDLEDMTKEK SQEWTDSSIT ALLDIYEEKW  60
NYLKRGNLRS RDWSELALQV SARCHGPKAV KTASQCKNKI ESMKKKYRAE KQSRNSTGTA  120
PRWKFFTCLD TMLSGAPPPL KVLSVPPAPP PPDLGCQPAV VDIDSREGLA QVESGDSGAQ  180
ECPTHVLVAP CLTNMAQSNA VHNTCCLVRA RKSTVHASVA IVVSRQTSVQ PLEETVTIST  240
DQEFQEFLEN EDSFLFDETN KKVVHFMSLR NNRHYHLEQK PGKVITLRSP SRLPPTFLRV  300
KLRNTKEFDS FLRSMGFVGL LPFPSNKDMD SLVLKYSELV DGSICVGYKP GRLPFMDDFQ  360
DDEKDRIQQQ *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	9e-21	Trihelix family protein

Link Out ? help Back to Top
Phytozome	Sphfalx0009s0188.1.p