PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0007s0153.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family LFY
Protein Properties Length: 315aa    MW: 33661.4 Da    PI: 5.0057
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0007s0153.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY37.24.7e-129920441155
               FLO_LFY  41 aaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkr 129
                               a+++ +le +f+++Gvr  t+ak++elGft +++     +el  ++ s+ + + + + vGe  Gik+a +  ++   ee+ +   
  Sphfalx0007s0153.1.p  99 PPPGATTAPDLELFFEGFGVRGETIAKVKELGFTSKAFTSNL-DELPSIIVSIKQ-HSCHVTVGEEQGIKCAAKHWQK---EEN-SPVS 181
                           3334445669*************************9987755.589999999876.6899***********9654443...322.2222 PP

               FLO_LFY 130 rkllsedeetaldalsqeglseepvq 155
                           r  +s d++    +  +eg s+++++
  Sphfalx0007s0153.1.p 182 R--VSGDNKG-ASSSQTEGQSQQTST 204
                           2..3455443.233333444444333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MHIQSHLLGD KCSAGLCGSL SCPEDTMEEL RIIVDDTAES PTKRKQEEKM DGGVIKASSK  60
TNCENGTDSR LRMKGKEKIT AVEQASIGNG LLFQAKAQPP PGATTAPDLE LFFEGFGVRG  120
ETIAKVKELG FTSKAFTSNL DELPSIIVSI KQHSCHVTVG EEQGIKCAAK HWQKEENSPV  180
SRVSGDNKGA SSSQTEGQSQ QTSTGQGIPS VPAGNTHEAL FGNQRAKVPE NASTDLSRDD  240
CLAMGDLDTV KQYQELKLSS RRYNIPAKTI SGNEVVAING WVPSFGVDKD GHIESISDFD  300
APFNTSGQGS EENM*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024369664.17e-38uncharacterized protein LOC112279448
TrEMBLA9SZ724e-37A9SZ72_PHYPA; Predicted protein
STRINGPP1S140_156V6.12e-38(Physcomitrella patens)