PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0007s0151.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family LFY
Protein Properties Length: 304aa    MW: 33383.7 Da    PI: 5.2926
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0007s0151.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY32.51.3e-105016939152
               FLO_LFY  39 aaaaaaarklr..........eleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslseifrldllvGeryGikaavraer 117
                            +++++a+  +          +le +f+++Gv+  t+ak++elGft +++     +el  ++ s+ + + + l + e  Gik+a +  +
  Sphfalx0007s0151.1.p  50 GKEKMTAV--EqqppgappapDLETFFEGFGVKGETIAKLKELGFTSKAFTAN-FDELPLIVVSIKQ-HSCHLTIEEEQGIKCAAKYWQ 134
                           22222222..13355566666*************************9998765.5689999999866.789*************99877 PP

               FLO_LFY 118 rrlee...eeaekkrrkllsedeetaldalsqeglsee 152
                           + + +      e+k ++ +++  e+ ++ +++   +e+
  Sphfalx0007s0151.1.p 135 KGIIKmmaV--EQKWKEKMTA-VEQGIKCIAKHWQKEK 169
                           765553332..2332322211.1222333333222221 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MEELHINVDD KAESQLMKRK QEEKTEGGVI EASSKKSCEN GTDNRLRMKG KEKMTAVEQQ  60
PPGAPPAPDL ETFFEGFGVK GETIAKLKEL GFTSKAFTAN FDELPLIVVS IKQHSCHLTI  120
EEEQGIKCAA KYWQKGIIKM MAVEQKWKEK MTAVEQGIKC IAKHWQKEKN SPVIRVSGNN  180
KGDSSSQTEG QSQQTSTGQG IPAVPAGNTH EAPFSNQRAE MPEDASTDLS MGDWLAMGDL  240
DIVKQYPELK LSNQHCNLPA KTISGNELVA INGWVPGFGV SEDGHIEAIF DFDALFDTSS  300
QRK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-