PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0004s0225.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | BES1 | ||||||||
Protein Properties | Length: 388aa MW: 41144.8 Da PI: 8.6303 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 165 | 4.6e-51 | 5 | 102 | 1 | 97 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasa 88 +gs+r ptwkErEnnkrRERrRRaiaaki+aGLR +Gnyklpk++DnneVlkALc+eAGw+ve+DG tyrkg++p ++++ + + Sphfalx0004s0225.1.p 5 AGSTRLPTWKERENNKRRERRRRAIAAKIFAGLRTYGNYKLPKHCDNNEVLKALCAEAGWTVEEDGRTYRKGTNPRpAVEQQMEVCTAT 93 589************************************************************************95333333333333 PP DUF822 89 spesslqss 97 p s ++ + Sphfalx0004s0225.1.p 94 GPASVISPA 102 333333322 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 1.1E-47 | 6 | 106 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005773 | Cellular Component | vacuole |
Sequence ? help Back to Top |
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Protein Sequence Length: 388 aa Download sequence Send to blast |
MTAAAGSTRL PTWKERENNK RRERRRRAIA AKIFAGLRTY GNYKLPKHCD NNEVLKALCA 60 EAGWTVEEDG RTYRKGTNPR PAVEQQMEVC TATGPASVIS PAASSYIPGA SVDGTSSLIP 120 WLKGLSASAA GTRAGGNGHG CCNSSSTATS APVTPPLSSP KLAKTSCISA ADNVKADWGA 180 AIAKDTAVGR FIIPETLYPM QQQQQQPAFS QAAAEKAELW SQYCSKSFLA AAAATNQQSQ 240 LHQVLRPAAC SSYNCETPDG CRTPAAVESD FSPRNSAAPT ALTFANNYLS SSSTSSATKS 300 WANGIRVQRT QGSSSTAADV LQEFKSAPVS GTANYVLNGS CNMQQRFIDK SSIPTSDHLL 360 YSDSTSETPY LNHPWCTCCS TTPGLQSS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 1e-21 | 9 | 82 | 372 | 445 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 1e-21 | 9 | 82 | 372 | 445 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 1e-21 | 9 | 82 | 372 | 445 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 1e-21 | 9 | 82 | 372 | 445 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024357987.1 | 1e-43 | BES1/BZR1 homolog protein 4-like | ||||
Refseq | XP_024362740.1 | 1e-43 | protein BZR1 homolog 1-like | ||||
TrEMBL | A0A2K1ITH7 | 2e-42 | A0A2K1ITH7_PHYPA; Uncharacterized protein | ||||
TrEMBL | A9TVH7 | 2e-42 | A9TVH7_PHYPA; Predicted protein | ||||
STRING | PP1S335_68V6.1 | 4e-43 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 8e-27 | BES1/BZR1 homolog 4 |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0004s0225.1.p |