PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0002s0165.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | G2-like | ||||||||
Protein Properties | Length: 680aa MW: 73137.2 Da PI: 6.2063 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 95.7 | 3.5e-30 | 345 | 399 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWtpeLHe+F+ +v qLGG+++AtPk++l+lm+v+g+t+ hvkSHLQkYRl Sphfalx0002s0165.2.p 345 KTRLRWTPELHEKFLTVVGQLGGADRATPKAVLRLMGVQGITIFHVKSHLQKYRL 399 68****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 9.823 | 342 | 402 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 2.1E-28 | 343 | 400 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.22E-16 | 344 | 400 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.1E-22 | 345 | 400 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.5E-7 | 347 | 398 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 5.6E-19 | 431 | 476 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 680 aa Download sequence Send to blast |
MRLDSGCGAE AGGGRGRGEG GDCGDGEVVA GLQQSSASMR YRHGYCQPSH MDNQQVGLQG 60 DSDLPFQYHY PPQRPYLAQP SSEPETSSPH FRHQRMAPLP SYQSPEHWGL DVQRSNRHPQ 120 GHLHSFPHAH PQQQQGGGHS YVDRQQLLLP SPSAVDRPQQ TLARSSSVSS HPGFRVGCEQ 180 LEKPGGGGSY ALGHTGRESH QNFLNVDLEV ASQSIGVVAH PNSAPDQPIG PKTEEDKDDA 240 DFGDQLKILL DSPDRGGTDS SQMGDRSMND GFGTGAEWLT WTELVPEEET IANCWTEIID 300 VKSGEERTLF QTTRFEPLAP TPVKLGGSPT DQQPSGAAVA AAAAKTRLRW TPELHEKFLT 360 VVGQLGGADR ATPKAVLRLM GVQGITIFHV KSHLQKYRLA KYSPDISDEA RAEWRRSDTY 420 LSPIGINSSH QITQALQLQM QVQKQLHEQL EIQRELQLRI EAQGKSLQKM IEQQAKVGGM 480 VLGYHSEPCD PSSSPLFPAT PVPEILRSSS KIPITGSEGS PLASITEIVI SMTDKTPLPE 540 SNIDQSNPSH GLLSASKAVS QEQPPMSLNA SNEDPLSKRP RTDSKPQVSS FLHVPVSVAS 600 DAQSGGGSAA QGGILQAAGL ETSLEMVTQY ATCQEVEAHT ATEGQLAHSF GKCAPQQAHT 660 ACAQPNPGSI THKPVRASG* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 8e-22 | 345 | 402 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 8e-22 | 345 | 402 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 8e-22 | 345 | 402 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 8e-22 | 345 | 402 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 2e-42 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0002s0165.2.p |