PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0002s0165.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | G2-like | ||||||||
Protein Properties | Length: 695aa MW: 74583.7 Da PI: 6.2068 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 95.7 | 3.6e-30 | 360 | 414 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWtpeLHe+F+ +v qLGG+++AtPk++l+lm+v+g+t+ hvkSHLQkYRl Sphfalx0002s0165.1.p 360 KTRLRWTPELHEKFLTVVGQLGGADRATPKAVLRLMGVQGITIFHVKSHLQKYRL 414 68****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 9.823 | 357 | 417 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 2.1E-28 | 358 | 415 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.25E-16 | 359 | 415 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.1E-22 | 360 | 415 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.5E-7 | 362 | 413 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 5.8E-19 | 446 | 491 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 695 aa Download sequence Send to blast |
MRLDSGCGAE AGGGRGRGEG GDCGDGEVVA GLQQSSASMR YRHGYCQPSH MDNQQVGLQG 60 DSDLPFQYHY PPQRPYLAQP SSEPETSSPH FRHQRMAPLP SYQSPEHWGL DVQRSNRHPQ 120 GHLHSFPHAH PQQQQGGGHS YVDRQQLLLP SPSAVDRPQQ TLARSSSVSS HPGFRVGCEQ 180 LEKPGGGGSY ALGHTGRESH QNFLNVDLEV ASQSIGVVAH PNSAPDQPIG PKTEEDKDDA 240 DFGDQLKILL DSPDRGGTDS SQMGDRSMND GFGTGAEWLT WTELVPEEET IANCWTEIID 300 VKSGEERTLF QTTRFEPLAP TPVKLGGSPT DQQPSGSAGK QYPESPGLSS GAAVAAAAAK 360 TRLRWTPELH EKFLTVVGQL GGADRATPKA VLRLMGVQGI TIFHVKSHLQ KYRLAKYSPD 420 ISDEARAEWR RSDTYLSPIG INSSHQITQA LQLQMQVQKQ LHEQLEIQRE LQLRIEAQGK 480 SLQKMIEQQA KVGGMVLGYH SEPCDPSSSP LFPATPVPEI LRSSSKIPIT GSEGSPLASI 540 TEIVISMTDK TPLPESNIDQ SNPSHGLLSA SKAVSQEQPP MSLNASNEDP LSKRPRTDSK 600 PQVSSFLHVP VSVASDAQSG GGSAAQGGIL QAAGLETSLE MVTQYATCQE VEAHTATEGQ 660 LAHSFGKCAP QQAHTACAQP NPGSITHKPV RASG* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 8e-22 | 360 | 417 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 8e-22 | 360 | 417 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 8e-22 | 360 | 417 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 8e-22 | 360 | 417 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 3e-42 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0002s0165.1.p |