PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sphfalx0001s0378.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
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Family | BES1 | ||||||||
Protein Properties | Length: 388aa MW: 40279.1 Da PI: 7.733 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 171.9 | 3.4e-53 | 2 | 98 | 1 | 100 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasas 89 ++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+v++DGttyrkg+kp+ ++ ++ ++s Sphfalx0001s0378.1.p 2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRSYGNYKLPKHCDNNEVLKALCAEAGWIVDEDGTTYRKGTKPP-SSVGQQQQMEVS 89 5899************************************************************************.333333333333 PP DUF822 90 pesslqsslks 100 p+ s++ ++s Sphfalx0001s0378.1.p 90 PSPSVS--PTS 98 333322..222 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 8.8E-51 | 3 | 102 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 388 aa Download sequence Send to blast |
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRSYGNY KLPKHCDNNE VLKALCAEAG 60 WIVDEDGTTY RKGTKPPSSV GQQQQMEVSP SPSVSPTSSC PGASDGTSLI PWLKGLSSCH 120 GGGGGSSGTA STSSSAGLPP LHVMHGKSAS APVTPPLSSP TARGIPIKTE WDAAIARDGF 180 SECPTHAFSQ AAVNAWSHHS SLLAAAAAAA TAALNQSHLR PGYCDTPDGC RTPADEVESD 240 FSPATALEFT SMGVSTSSKW ADGIRVHVGP AGSAPQGISS GASGCIVGGM GLGPFPTMAQ 300 SETPPETPAY CNPWHGGSMQ PAASMPSPRT APRLLNPCRA EKLAINLEST DVQASWEMTP 360 EALGKRKVPD ELELTLGSSS LHTSPAQ* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 4e-22 | 6 | 76 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 4e-22 | 6 | 76 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 4e-22 | 6 | 76 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 4e-22 | 6 | 76 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024357987.1 | 1e-108 | BES1/BZR1 homolog protein 4-like | ||||
TrEMBL | A0A2K1ITH7 | 1e-106 | A0A2K1ITH7_PHYPA; Uncharacterized protein | ||||
STRING | PP1S335_68V6.1 | 1e-105 | (Physcomitrella patens) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 4e-31 | BES1/BZR1 homolog 4 |
Link Out ? help Back to Top | |
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Phytozome | Sphfalx0001s0378.1.p |