PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0001s0189.1.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family G2-like
Protein Properties Length: 534aa    MW: 57647.2 Da    PI: 6.4321
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0001s0189.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.23.2e-32311366156
               G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                           k+r++W+peLH+rFv+a++qLGGs++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  Sphfalx0001s0189.1.p 311 KARRCWSPELHQRFVRALQQLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 366
                           68****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.951308368IPR017930Myb domain
Gene3DG3DSA:1.10.10.603.5E-29308369IPR009057Homeodomain-like
SuperFamilySSF466891.83E-17309369IPR009057Homeodomain-like
TIGRFAMsTIGR015572.8E-26311366IPR006447Myb domain, plants
PfamPF002495.7E-8313364IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 534 aa     Download sequence    Send to blast
MASPPDLSLG CQTQAPSSAS TITSSEVSNP LVNNQLGRIQ ALEDEQRKIE AFKRELPLCM  60
QLLEEAIAKS KEQLEEMQPA PGTPQQPLQL RCSTPEKSQS NVSSPNDNNK LVLKEFMPLK  120
KRRLERLQGG DQLLGGDEEG DRQVERTRGI DIGRPAWMAE AQLWTQHAAI AEARNEKDLS  180
PEDRCGQGEC TRAAQANGSI ETSRLLLSSK QRPTGAFLPF TRKKQLTPPA VVSQSNPVTS  240
NGANLSLSSV QQLPGLEGQA FLVAESEVGG IDAGLSTQEV NAEGCMKRPL LKVVSGAGST  300
CSEGGSQSQR KARRCWSPEL HQRFVRALQQ LGGSQVATPK QIRELMKVDG LTNDEVKSHL  360
QKYRLHTQRP SPPPQSASAH APQLVVLGTI WGPDPDYVAA AAAAAQTAAA GVYDPSVSHH  420
SHQYSSYCKS TLPQDHFANF NNNRRSENKP QMQEPDCPQS QQAVSQSQTS PQAPLQVTNP  480
VSSGVGYQYD SGGEEGKSDS TSWKGRPLET GGGDREEESQ IQIKPQAAAA DQL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A7e-15311369260Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B7e-15311369260Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A6e-15311364154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B6e-15311364154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C6e-15311364154Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D6e-15311364154Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A7e-15311369260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C7e-15311369260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D7e-15311369260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F7e-15311369260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H7e-15311369260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J7e-15311369260Protein PHOSPHATE STARVATION RESPONSE 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.15e-50G2-like family protein