PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0000s0278.2.p
Organism
Sphagnum fallax
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family CAMTA
Protein Properties Length: 1211aa    MW: 135605 Da    PI: 5.8279
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0000s0278.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1171.11.6e-53231403117
                  CG-1   3 ke.kkrwlkneeiaaiLenfekheltl..elktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahs 88 
                           +e ++rwlk+ e++++L+n++ h ++l   ++ +p sgsl+L++r ++ryfrkDG++w+kkkdg+tvrE+he+LK+g+v+vl+cyYah+
  Sphfalx0000s0278.2.p  23 TEaQNRWLKPVEVCEVLNNYQIHGFKLnpIAPVKPASGSLFLFDRNVLRYFRKDGHNWRKKKDGRTVREAHERLKIGNVDVLHCYYAHG 111
                           4449*******************9998667899******************************************************** PP

                  CG-1  89 eenptfqrrcywlLeeelekivlvhylev 117
                           e+n +fqrrcywlL+ ++++ivlvhy+ev
  Sphfalx0000s0278.2.p 112 ETNLNFQRRCYWLLDPSMDHIVLVHYREV 140
                           ***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143776.47218146IPR005559CG-1 DNA-binding domain
SMARTSM010761.7E-6621141IPR005559CG-1 DNA-binding domain
PfamPF038594.4E-4924139IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.102.1E-8561672IPR013783Immunoglobulin-like fold
SuperFamilySSF812962.29E-14584671IPR014756Immunoglobulin E-set
SuperFamilySSF484037.15E-20772881IPR020683Ankyrin repeat-containing domain
CDDcd002045.42E-15776879No hitNo description
Gene3DG3DSA:1.25.40.201.3E-20780883IPR020683Ankyrin repeat-containing domain
PfamPF127964.2E-7781848IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029719.651787891IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008811.381820852IPR002110Ankyrin repeat
SMARTSM002486.1E-6820849IPR002110Ankyrin repeat
SuperFamilySSF525403.19E-79781056IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF006120.249891002IPR000048IQ motif, EF-hand binding site
SMARTSM000150.09410041026IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.21210051034IPR000048IQ motif, EF-hand binding site
PfamPF006120.001810081025IPR000048IQ motif, EF-hand binding site
SMARTSM000150.8610271049IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.02910291056IPR000048IQ motif, EF-hand binding site
PfamPF006122.6E-410311049IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1211 aa     Download sequence    Send to blast
MASARRPRSQ PLQPKTNIED IVTEAQNRWL KPVEVCEVLN NYQIHGFKLN PIAPVKPASG  60
SLFLFDRNVL RYFRKDGHNW RKKKDGRTVR EAHERLKIGN VDVLHCYYAH GETNLNFQRR  120
CYWLLDPSMD HIVLVHYREV DELGRIVISD MHSTPPSHVP SPPEGSRSSS MSIAHEHEGG  180
DAGEFEEVSN VSPAEACRSV LNSCITQLEQ DPPLQQKPGT LEVRPGWTVL DSLSMSRNSE  240
TLRPALAGIE RMLDSPGVFP LGVSQSSLLL PSPLGPEHLN REQQQSEYSL PMQGSSEESV  300
NSSAESRTKS NGVGLQPFTK EEELDIVEWK ELLGNTQSNQ KVSSNQTGGV GGSATSDEVV  360
RSMDGLNWTD MLEQCTTPET HQALLDLDQS ENEPVVQLVN DFSQQEGLSY LTQVLSPTVP  420
TPNVQCQDPL RKENAPKAHQ KQFPLTRVDL QNTKARWDGE ILDLEHSTLV NIQNSEVQSL  480
KEAAGNKNME VESLTKNLEL DSFMKESSVD DLELDKFKKL NSFGRWMSTQ LSDNSESLLM  540
DSGWPSTPVL EDRGVGEDVN GISVELQAES GVNTSVTLAQ RYSIIDFSPG YGYSSEETKV  600
IVTGMFIGDN SSRVSDFRWH CMFGEIEVPA ELLGGEALRC NAPAQAAGRV AFYITCGDRQ  660
AHSEICEFEY RNATRADSKP VNFEHHSENE MLLKIHLAHM LLEVVDSPKT HNEGDSLKQS  720
SHSDFLNTMC THDEWLYLEL LATTPGDLQT LDFHEQLLQM LLKSHMQRWL QCRIEDEGKG  780
PAVLNEKGQG VLHMAAALGY HWAIAPLMSA GLPINFRDVH GWTALHWAAW YGQEEAIVHL  840
LEAGADPAAV TDPTVTNTAG QSAADLAATN GHVGISGFLA ESSLRARLSS MTVSEDPIDI  900
ALSCIAGDNA VAKLAHRESL KRSVVRLEDQ RSLEASIEAL RNAARSKALI QAAFRQHSFQ  960
KRENDTLASM QSDEYDLTTI ELQAWITANA AKKIQKAYRG HHGKQQLAAI RIQNKFRGWR  1020
ARRDFLSFRQ HIVKLQAHVR GNLVRKRFKK LLWSVSIVEK AILRWLRRRH GLRGFKNEFC  1080
LPDNDNDEFL REGRKRTEVA LEIAVTRVEG MVPSSTGRAQ YLRLREKSLE SHQKGKSPEP  1140
EAHQLMQSSK PEMQQQTQSC QVSIPDYVQA SDDQFMSFRE SEHQGQNTQV PPPHVFPDTT  1200
DDALMIFTVE *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1917922ESLKRS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.21e-108Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains