PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sphfalx0000s0040.4.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Bryophyta; Sphagnophytina; Sphagnopsida; Sphagnales; Sphagnaceae; Sphagnum
Family G2-like
Protein Properties Length: 519aa    MW: 57457.7 Da    PI: 7.692
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sphfalx0000s0040.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.89.2e-32286339255
               G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                           pr+rWt+ LH++Fv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Sphfalx0000s0040.4.p 286 PRMRWTNSLHQQFVHAVELLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRT 339
                           9****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.87E-16283339IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.9E-28284339IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-24285339IPR006447Myb domain, plants
PfamPF002493.5E-8287338IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 519 aa     Download sequence    Send to blast
MQESFFTKSL NSSNEEAAHI IIPPAVAGPD LSLQICPPNS YNQLQQQQPP SFPSGLVLAS  60
SNTPHEPMRY PDDFKHKMTP QDTLWLGDHQ NLQPWVNDAK LAAMPPGTVQ LNPISWNRSL  120
ARHAKAGQHE KSHEHIHCGF DLWERQQKSA NCNANSDMSY VSSPRKCYDH EASFGTTASR  180
PDLCIANPSL DLQAASDHGT FSLPAEEKTR GVLHNLQSEY VKPTVAGGLY HCLQSSSNSQ  240
SLLPNLMHIT AGDCTSISSN LQETTRILHC GFIMSKSPSK RSMRNPRMRW TNSLHQQFVH  300
AVELLGGHER ATPKSVLELM NVKDLTLAHV KSHLQMYRTV KTTRQNDFAE SPHNNGRNYG  360
EFLMAQGSLT NRGLETSTFL PKSSNYYSTL GDAQATLLLM QNKKPSQQEA SNLWHSPALI  420
PYSSNCIGLE QQLKATHTLS QDKGMENQWM MGLTSPSIKQ PPLQFSPPLS EFVSSHTTNI  480
IPKMPNLEFT LGTSGWSSTR GLDHGATDAP QGLFLLKC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-17287341458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-17287341458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-17287341458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-17287341458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-17287341458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-17287341458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-17287341458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-17287341458Protein PHOSPHATE STARVATION RESPONSE 1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.14e-34G2-like family protein