PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RrC39740_p1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
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Family | TCP | ||||||||
Protein Properties | Length: 105aa MW: 11852.2 Da PI: 8.7721 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 27.8 | 8e-09 | 7 | 81 | 40 | 97 |
TCP 40 GfdkdsktieWLlqqakpaikeltgt................ssssaseceaesssssasnsssg.......kaaksaaks 97 G+ +d +ti+ Ll q++pa ++ t t + ++++e+ s+s+ + + +++ks+ak+ RrC39740_p1 7 GHTSDTETIQCLLHQSEPAAIATTTTrtlllsfacthphqhhQMPPKNET------HSSSERNYTrerprgeRKRKSTAKE 81 9*************************988888885443333322222222......2222122221122222222222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 105 aa Download sequence Send to blast |
MSFSSHGHTS DTETIQCLLH QSEPAAIATT TTRTLLLSFA CTHPHQHHQM PPKNETHSSS 60 ERNYTRERPR GERKRKSTAK ENVQGNALFG IAEKVKAMHL IGEYE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 67 | 75 | RPRGERKRK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |