PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 30226.m002055
Common NameRCOM_1778810
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
Family bZIP
Protein Properties Length: 310aa    MW: 34616.1 Da    PI: 9.4766
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
30226.m002055genomeJCVIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_151.13e-16251294548
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                    +r++r++kNRe+A rsR+RK+a++ eLe kv  LeaeN++L+k+
  30226.m002055 251 RRQKRMIKNRESAARSRARKQAYTNELEHKVSRLEAENERLRKR 294
                    79****************************************86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.1E-16240295No hitNo description
SMARTSM003385.2E-14247309IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.553249304IPR004827Basic-leucine zipper domain
PfamPF001709.2E-14251294IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-12251298No hitNo description
CDDcd147077.73E-21251293No hitNo description
PROSITE patternPS000360254269IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MGIQTMGSQA DGSSNGKQSQ FQPLARQNSM YSLTLDEVQH QLGDLGKPLS SMNLDELLKN  60
VWTAEANHTI GMEVEGTQLA NQTALQRQAS LSLTSALSKK TVDEVWRDIQ EGKNNEGKKS  120
RDRQPTLGEM TLEDFLVKAG VVAEASSEKK DDSPVVRVET NVGSQFPQQS QWIQYPHPQY  180
QHPQQSMMGV YLPAQSMPQP LHMGAGAVLD VSYPENQLSL PTSLMGTLSD VQTPARKRGT  240
PEDMMEKTVE RRQKRMIKNR ESAARSRARK QAYTNELEHK VSRLEAENER LRKRKVILGG  300
ELKKGMLISA
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00409DAPTransfer from AT3G56850Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap30226.m002055
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015584621.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_015584623.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
RefseqXP_025015910.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1
SwissprotQ9LES34e-82AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLB9REP30.0B9REP3_RICCO; DNA binding protein, putative
STRINGXP_002512212.10.0(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132034105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.14e-75ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]