PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 30170.m014243
Common NameLOC8269953, RCOM_1602280
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
Family bZIP
Protein Properties Length: 306aa    MW: 33780 Da    PI: 4.4226
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
30170.m014243genomeJCVIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.41.5e-08145187446
                    XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                    +k+ rr  +NR AA rsR+RKk ++  Le k+  Le+e ++L 
  30170.m014243 145 SKKRRRQLRNRDAAVRSRERKKIYVRDLEIKSRYLEGECRRLG 187
                    6999*********************************998875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.6E-11140201No hitNo description
SMARTSM003387.7E-6142206IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.726144201IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.88E-10146201No hitNo description
PfamPF001701.2E-6146188IPR004827Basic-leucine zipper domain
CDDcd147043.67E-17147198No hitNo description
PROSITE patternPS000360149164IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0016021Cellular Componentintegral component of membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MEDTDDILES VNFDSLGQID WDNLFDDNSP LLVTESSSSP ENFSDSSPDS VSLWIDQVEN  60
MLMKDDDVLA SAEPSQHFSE GFLADLLVDS PADGSVDLST DKDSIVSPDN GFGGASETEK  120
EGEKILSNNE AKVDNDSEDP DDPVSKKRRR QLRNRDAAVR SRERKKIYVR DLEIKSRYLE  180
GECRRLGRLL QCFVAENQAL RLGLQKGNAF GVTLAKQESA VLLLESLLLG SLLWFLGIMC  240
LFTLSAMSQL TLVAVPLENV GKKVPERGAG SKMFTSLANQ SFVNSRKCKA SRTRMKAESV  300
FIGVLV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1146165KRRRQLRNRDAAVRSRERKK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMap30170.m014243
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF0220061e-124KF022006.1 Jatropha curcas basic leucine zipper 60 (bZIP60) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002510740.10.0bZIP transcription factor 60
TrEMBLB9R8U70.0B9R8U7_RICCO; Uncharacterized protein
STRINGXP_002510740.10.0(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120093032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.19e-24basic region/leucine zipper motif 60