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Plant Transcription
Factor Database
Previous version:
v3.0
v4.0
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
30170.m013590 |
| Common Name | LOC8265271, RCOM_1586710 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus
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| Family |
GRAS |
| Protein Properties |
Length: 471aa MW: 53788.6 Da PI: 6.0023 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| 30170.m013590 | genome | JCVI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 309.4 | 8.2e-95 | 96 | 451 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98
+ L++cAeav++++l+la+ +L+++ l++++++++q +aa f+eA+++r++r l p+ + s ++++f++ ++k +hlta
30170.m013590 96 NMLIACAEAVEENNLHLAEIILSQI--LVNSKARATQSMAALFAEAMSSRVYR--------LYPQYFD---YSYLNDIQRYFYKEWSYVKAAHLTA 178
78*********************99..6888999*******************........5566665...4455556889999999********* PP
GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
N+ I e ++g++++H+iDf i++G+QW L+q La+Rp+gpp++Ri g+g p++++++ l+++g++La++Ae+l+++fe++ ++a +l+dl+ +L
30170.m013590 179 NREIFETFAGKKHIHVIDFFINHGTQWSDLMQDLAARPGGPPTIRISGIGFPNHDNSDYLKSVGWKLAQLAETLNIDFEYRGFLAYNLADLDAAML 274
***********************************************************************************9************ PP
GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErell 290
+++++Ea+aVn v++lh+ll++++++++ +L++vk+++P++++++eqe+d n++ F rf e+++y+s l++s e + ++ +l
30170.m013590 275 ELRTHEAIAVNAVFALHKLLARPGDIHK----LLSMVKHIEPEIFTIIEQESDNNDQGFSYRFNECINYFSFLLESSEGS------TNCLDTYIFL 360
**************************99....*********************************************999......2333334568 PP
GRAS 291 greivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdg.......yrveeesgslvlgWkdrpLvsvSaWr 374
+++i n+v ceg+ r+er e+l +Wr rle+aGF ++l++++ + a+ l ++ + + ++ee++g+ +lgW++rpL+++SaWr
30170.m013590 361 RNQIHNIVVCEGEYRVERYEKLTRWRTRLEAAGFVLIHLGSNVGEYASFLSSQPATRNmlqasskCTIEENNGCWMLGWRTRPLIAISAWR 451
899****************************************9999998766543322222223788899*******************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 471 aa
Download sequence Send
to blast |
MHWVFPHPSS ANHDSLSKPS STTSPNITDH AEHFQLNSSF SSRESERFNL EPQHSSACSS 60
SSTVDGPYRP FSDLAKSIHP ILEIDFEQNT RVPLFNMLIA CAEAVEENNL HLAEIILSQI 120
LVNSKARATQ SMAALFAEAM SSRVYRLYPQ YFDYSYLNDI QRYFYKEWSY VKAAHLTANR 180
EIFETFAGKK HIHVIDFFIN HGTQWSDLMQ DLAARPGGPP TIRISGIGFP NHDNSDYLKS 240
VGWKLAQLAE TLNIDFEYRG FLAYNLADLD AAMLELRTHE AIAVNAVFAL HKLLARPGDI 300
HKLLSMVKHI EPEIFTIIEQ ESDNNDQGFS YRFNECINYF SFLLESSEGS TNCLDTYIFL 360
RNQIHNIVVC EGEYRVERYE KLTRWRTRLE AAGFVLIHLG SNVGEYASFL SSQPATRNML 420
QASSKCTIEE NNGCWMLGWR TRPLIAISAW RADNRILISD EDGALQKLER M
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